RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 DOPEY1Q5JWR5 2465 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 hADV29S1A0JD25 119 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 ZNF73O43830 326 aaPredicted RBP3.76□□□□□ -1.81
NUP54-210ENST00000510884 BCE1O60756 84 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 SLC25A14O95258 325 aaPredicted RBP3.76□□□□□ -1.81
NUP54-210ENST00000510884 CPSF4O95639 269 aaKnown RBP3.76□□□□□ -1.81
NUP54-210ENST00000510884 UBE2BP63146 152 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 CXCL6P80162 114 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 MIC13Q5XKP0 118 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 NCBP2-AS2Q69YL0 99 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 PHF5AQ7RTV0 110 aaKnown RBP3.76□□□□□ -1.81
NUP54-210ENST00000510884 TMEM252Q8N6L7 170 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 OR8A1Q8NGG7 326 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 TMEM158Q8WZ71 300 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 ODF3Q96PU9 254 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 CCL13Q99616 98 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 IL36BQ9NZH7 164 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 KLK5Q9Y337 293 aaPredicted RBP3.76□□□□□ -1.81
NUP54-210ENST00000510884 SLC25A15Q9Y619 301 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 LOC285556D6RIA3 1793 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 SSC5DA1L4H1 1573 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 ITPR3Q14573 2671 aa3.76□□□□□ -1.81
NUP54-210ENST00000510884 RIF1Q5UIP0 2472 aaKnown RBP3.76□□□□□ -1.81
NUP54-210ENST00000510884 HECTD1Q9ULT8 2610 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 TRAV41A0A0B4J266 112 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 K7EM74 188 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 HBDP02042 147 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 GCHFRP30047 84 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 MP68P56378 58 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 HERVK_113P61574 105 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 FAM219BQ5XKK7 198 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 FAM104BQ5XKR9 115 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 Q6ZQT7 251 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 PDPNQ86YL7 162 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 MKXQ8IYA7 352 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 ZNF563Q8TA94 476 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 C10orf105Q8TEF2 133 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 TIMM17AQ99595 171 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 DEPPQ9NTK1 212 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 EPDR1Q9UM22 224 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 HHLA3Q9XRX5 114 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 KMT2EQ8IZD2 1858 aa3.75□□□□□ -1.81
NUP54-210ENST00000510884 ITPR1Q14643 2758 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 A0A087WZ39 114 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 TMEM256-PLSCR3K7ERE1 68 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 LST1O00453 97 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 PSPHP1O15172 72 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 CCL16O15467 120 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 HCRTO43612 131 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 TIMM17BO60830 172 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 NPYP01303 97 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 S100A4P26447 101 aaKnown RBP3.74□□□□□ -1.81
NUP54-210ENST00000510884 SYNJ2BPP57105 145 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 PCP2Q8IVA1 136 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 C3orf56Q8N813 242 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 TMEM75Q8N9X5 138 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 CSNK1G2-AS1Q8NCQ2 148 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 KLHL30-AS1Q8NEE0 82 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 TMEM243Q9BU79 118 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 PARP12Q9H0J9 701 aaKnown RBP3.74□□□□□ -1.81
NUP54-210ENST00000510884 HILPDAQ9Y5L2 63 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 VPS13AQ96RL7 3174 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 SCN8AQ9UQD0 1980 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 SCN7AQ01118 1682 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 CNOT1A5YKK6 2376 aaKnown RBP3.74□□□□□ -1.81
NUP54-210ENST00000510884 VWA8A3KMH1 1905 aa3.74□□□□□ -1.81
NUP54-210ENST00000510884 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
NUP54-210ENST00000510884 LOC389332A0A1B0GUA5 103 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 INS-IGF2F8WCM5 200 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 H3BMM0 161 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 M0R378 163 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 M0R381 172 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 CCL5P13501 91 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 CACNG7P62955 275 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 SERF2P84101 59 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 RPL18Q07020 188 aaKnown RBP3.73□□□□□ -1.81
NUP54-210ENST00000510884 NSUN5P1Q3KNT7 163 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 FBXL19-AS1Q494R0 122 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 DEFB121Q5J5C9 76 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 ATP1A1-AS1Q5TC04 95 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 UNQ9165/PRO28630Q6UXU0 137 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 NKAPP1Q8N9T2 125 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 ZNF721Q8TF20 911 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 SPTSSAQ969W0 71 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 UBE2WQ96B02 151 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 IFI27L1Q96BM0 104 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 ZC2HC1AQ96GY0 325 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 SPACA5Q96QH8 159 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 UPK3BQ9BT76 320 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 ANAPC11Q9NYG5 84 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 LOC400499M0QZD8 3231 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 FBN2P35556 2912 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 UBR5O95071 2799 aaPredicted RBP3.73□□□□□ -1.81
NUP54-210ENST00000510884 CACNA1HO95180 2353 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 COL1A1P02452 1464 aaPredicted RBP3.73□□□□□ -1.81
NUP54-210ENST00000510884 A0A0G2JMZ2 1700 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 LRRC37A2A6NM11 1700 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 LRRC37AA6NMS7 1700 aa3.73□□□□□ -1.81
NUP54-210ENST00000510884 IGHV3OR15-7A0A075B7D8 119 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms