RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 COMMD5Q9GZQ3 224 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 MED13LQ71F56 2210 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 M0R2P5 195 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 BRWD1-AS2P59051 145 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 ERCC8Q13216 396 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 FAM218AQ96MZ4 157 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 PARP12Q9H0J9 701 aaKnown RBP7.33□□□□□ -1.24
USP53-207ENST00000510852 ZNF469Q96JG9 3925 aaPredicted RBP7.33□□□□□ -1.24
USP53-207ENST00000510852 SVEP1Q4LDE5 3571 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 C9orf118A6NHY6 69 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 HMSDA8MTL9 139 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 C17orf98A8MV24 154 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 PPYP01298 95 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 FXYD4P59646 89 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 OR2T35Q8NGX2 323 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 CCDC168Q8NDH2 2452 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 DSCAML1Q8TD84 2053 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 TRBV7-6A0A0J9YX20 115 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 EPM2AB3EWF7 344 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 IGHV3-7P01780 117 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 SFTA3P0C7M3 94 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 IGHV1-8P0DP01 117 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 FABP2P12104 132 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 LINC00305Q7Z4B0 112 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 MAPK1IP1LQ8NDC0 245 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 ATP6V0E2Q8NHE4 81 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 LEAP2Q969E1 77 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 FXYD6Q9H0Q3 95 aa7.32□□□□□ -1.24
USP53-207ENST00000510852 KLK5Q9Y337 293 aaPredicted RBP7.32□□□□□ -1.24
USP53-207ENST00000510852 DOCK11Q5JSL3 2073 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 PRRC2AP48634 2157 aaKnown RBP7.31□□□□□ -1.24
USP53-207ENST00000510852 SLC25A5P05141 298 aaKnown RBP7.31□□□□□ -1.24
USP53-207ENST00000510852 CRYGAP11844 174 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 SPATA45Q537H7 98 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 RPP25LQ8N5L8 163 aaKnown RBP7.31□□□□□ -1.24
USP53-207ENST00000510852 Q8N7P7 452 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 OR9G1Q8NH87 305 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 ST20Q9HBF5 79 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 NOTCH2Q04721 2471 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 M0R1W7 72 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 CDK2AP2O75956 126 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 RBP4P02753 201 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 PYYP10082 97 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 BVES-AS1Q5T3Y7 98 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 PRNTQ86SH4 94 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 VSTM2AQ8TAG5 236 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 IMMP2LQ96T52 175 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 ARHGAP32A7KAX9 2087 aa7.31□□□□□ -1.24
USP53-207ENST00000510852 FLNBO75369 2602 aaKnown RBP7.3□□□□□ -1.24
USP53-207ENST00000510852 TRAV41A0A0B4J266 112 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 A0A0G2JRQ6 117 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 KLLNB2CW77 178 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 TMEM250H0YL14 139 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 MSMBP08118 114 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 PI3P19957 117 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
USP53-207ENST00000510852 PRB3Q04118 309 aaPredicted RBP7.3□□□□□ -1.24
USP53-207ENST00000510852 MORN3Q6PF18 240 aaPredicted RBP7.3□□□□□ -1.24
USP53-207ENST00000510852 LSM10Q969L4 123 aaKnown RBP7.3□□□□□ -1.24
USP53-207ENST00000510852 B4DSR2 109 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 M0R381 172 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 Q56UQ5 140 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 RNF182Q8N6D2 247 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 IMUPQ9GZP8 106 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 NAA60Q9H7X0 242 aa7.3□□□□□ -1.24
USP53-207ENST00000510852 PITX3O75364 302 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 C11orf87Q6NUJ2 197 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 CCL28Q9NRJ3 127 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 ZNRD1Q9P1U0 126 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 SPCS1Q9Y6A9 102 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 BAHCC1Q9P281 2608 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 ABCA2Q9BZC7 2435 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 TRAV8-1A0A0A6YYK1 113 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 C3orf85A0A1B0GTC6 90 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 A8MUN3 132 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 IGLV2-14P01704 120 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 COX7A1P24310 79 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 ZNF818PQ6ZRF7 136 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 VMO1Q7Z5L0 202 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 GNPNAT1Q96EK6 184 aaPredicted RBP7.29□□□□□ -1.24
USP53-207ENST00000510852 ABHD14BQ96IU4 210 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 PGLYRP4Q96LB8 373 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 RNF126Q9BV68 326 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 LINC00527Q9UJ94 153 aa7.29□□□□□ -1.24
USP53-207ENST00000510852 JTBO76095 146 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 SLC25A4P12235 298 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 TPT1P13693 172 aaKnown RBP7.28□□□□□ -1.24
USP53-207ENST00000510852 PSMB3P49720 205 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 TAS2R45P59539 299 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 EBI3Q14213 229 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 C6orf223Q8N319 242 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 ZNF645Q8N7E2 425 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 CREBBPQ92793 2442 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 PGPA6NDG6 321 aa7.28□□□□□ -1.24
USP53-207ENST00000510852 SNCGO76070 127 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms