RNA–Protein interactions for RNA: ENST00000509198.1

LRPAP1-203, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 2

Gene LRPAP1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-203ENST00000509198 ZNF345Q14585 488 aa13.72□□□□□ -0.21
LRPAP1-203ENST00000509198 ZNF726P1Q15940 193 aa13.72□□□□□ -0.21
LRPAP1-203ENST00000509198 PRNTQ86SH4 94 aa13.72□□□□□ -0.21
LRPAP1-203ENST00000509198 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 GNRH2O43555 120 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 SMUG1Q53HV7 270 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 C6orf223Q8N319 242 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 STOML3Q8TAV4 291 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 C8orf49Q96NF6 230 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 CYTL1Q9NRR1 136 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 FRAS1Q86XX4 4008 aa13.71□□□□□ -0.21
LRPAP1-203ENST00000509198 A0A1B0GVY2 172 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 SMLR1H3BR10 107 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 GCGP01275 180 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 TYMSP04818 313 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 PFN1P07737 140 aaKnown RBP13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 CRYBA4P53673 196 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 FHL2Q14192 279 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 MRPL23Q16540 153 aaKnown RBP13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 KCNRGQ8N5I3 272 aa13.7□□□□□ -0.22
LRPAP1-203ENST00000509198 MAP1LC3B2A6NCE7 125 aa13.69□□□□□ -0.22
LRPAP1-203ENST00000509198 IGLV2-11P01706 119 aa13.69□□□□□ -0.22
LRPAP1-203ENST00000509198 UBE2G2P60604 165 aa13.69□□□□□ -0.22
LRPAP1-203ENST00000509198 OR4C5Q8NGB2 326 aa13.69□□□□□ -0.22
LRPAP1-203ENST00000509198 PCNPQ8WW12 178 aaKnown RBP13.69□□□□□ -0.22
LRPAP1-203ENST00000509198 MAP1LC3BQ9GZQ8 125 aa13.69□□□□□ -0.22
LRPAP1-203ENST00000509198 TRAV4A0A0B4J268 109 aa13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 A0A0D9SG52 128 aa13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 A0A1W2PPQ1 181 aa13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 HMSDA8MTL9 139 aa13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 FGF8P55075 233 aaPredicted RBP13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 HIST1H2BAQ96A08 127 aa13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 ZNF479Q96JC4 524 aa13.68□□□□□ -0.22
LRPAP1-203ENST00000509198 ORM1P02763 201 aa13.67□□□□□ -0.22
LRPAP1-203ENST00000509198 SFTA3P0C7M3 94 aa13.67□□□□□ -0.22
LRPAP1-203ENST00000509198 NEGR1Q7Z3B1 354 aa13.67□□□□□ -0.22
LRPAP1-203ENST00000509198 MUC4Q99102 2169 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 FAM74A7A6NL05 159 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 UMAD1C9J7I0 102 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 PEX7O00628 323 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 SRIP30626 198 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 ZNF80P51504 273 aaPredicted RBP13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 EIF5AP63241 154 aaKnown RBP13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 TCEAL7Q9BRU2 100 aa13.66□□□□□ -0.22
LRPAP1-203ENST00000509198 C9JCJ5 164 aa13.65□□□□□ -0.22
LRPAP1-203ENST00000509198 SEC11BP0C7V7 166 aa13.65□□□□□ -0.22
LRPAP1-203ENST00000509198 ZNF876PQ49A33 203 aa13.65□□□□□ -0.22
LRPAP1-203ENST00000509198 LINC00479Q96M42 142 aa13.65□□□□□ -0.22
LRPAP1-203ENST00000509198 ARL2-SNX15V9GYD0 113 aa13.65□□□□□ -0.22
LRPAP1-203ENST00000509198 TRAV34A0A0B4J273 112 aa13.64□□□□□ -0.23
LRPAP1-203ENST00000509198 SIVA1O15304 175 aa13.64□□□□□ -0.23
LRPAP1-203ENST00000509198 BTF3P20290 206 aaKnown RBP13.64□□□□□ -0.23
LRPAP1-203ENST00000509198 ZNF471Q9BX82 626 aaPredicted RBP13.64□□□□□ -0.23
LRPAP1-203ENST00000509198 FABP5P3A8MUU1 101 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 K7EQD1 137 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 BCL2L11O43521 198 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 CIDEAO60543 219 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 GYPEP15421 78 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 FHITP49789 147 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 CST9LP1Q5W188 147 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 OR11H4Q8NGC9 324 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 TXNDC17Q9BRA2 123 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 C11orf21Q9P2W6 132 aa13.63□□□□□ -0.23
LRPAP1-203ENST00000509198 DNAH6Q9C0G6 4158 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 PFDN1O60925 122 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 NXPH4O95158 308 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 UBE2G1P62253 170 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 LYPD5Q6UWN5 251 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 SH2D6Q7Z4S9 175 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 Q86TA4 180 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 SFT2D1Q8WV19 159 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 FMC1Q96HJ9 113 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 ZFP30Q9Y2G7 519 aa13.62□□□□□ -0.23
LRPAP1-203ENST00000509198 S100A4P26447 101 aaKnown RBP13.61□□□□□ -0.23
LRPAP1-203ENST00000509198 DPPA3Q6W0C5 159 aa13.61□□□□□ -0.23
LRPAP1-203ENST00000509198 C9orf85Q96MD7 179 aa13.61□□□□□ -0.23
LRPAP1-203ENST00000509198 TNP2Q05952 138 aa13.6□□□□□ -0.23
LRPAP1-203ENST00000509198 PTH2Q96A98 100 aa13.6□□□□□ -0.23
LRPAP1-203ENST00000509198 KRTAP1-5Q9BYS1 174 aa13.6□□□□□ -0.23
LRPAP1-203ENST00000509198 DNAH10Q8IVF4 4471 aa13.59□□□□□ -0.23
LRPAP1-203ENST00000509198 ASIPP42127 132 aa13.59□□□□□ -0.23
LRPAP1-203ENST00000509198 MBD3L1Q8WWY6 194 aa13.59□□□□□ -0.23
LRPAP1-203ENST00000509198 TRAV9-2A0A087WT02 112 aa13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 MED14OSP0DP75 135 aa13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 TPT1P13693 172 aaKnown RBP13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 GATA1P15976 413 aaPredicted RBP13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 FAM162BQ5T6X4 162 aa13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 CFAP126Q5VTH2 177 aa13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 NHLRC2Q8NBF2 726 aa13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 PRADC1Q9BSG0 188 aa13.58□□□□□ -0.24
LRPAP1-203ENST00000509198 HECTD4Q9Y4D8 3996 aa13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 B4DEV8 164 aa13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 RS1O15537 224 aa13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 PAGE4O60829 102 aa13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 RNASE3P12724 160 aaKnown RBP13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 AKR1C3P42330 323 aa13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 ZNF506Q5JVG8 444 aa13.57□□□□□ -0.24
LRPAP1-203ENST00000509198 TMUB2Q71RG4 321 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms