RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 KLK5Q9Y337 293 aaPredicted RBP7.73□□□□□ -1.17
PDGFRA-207ENST00000509092 IGKV2-40A0A087WW87 121 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 PATE3B3GLJ2 98 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 H3BT86 120 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 IGKV2D-40P01614 121 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 VMA21Q3ZAQ7 101 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 C2orf82Q6UX34 121 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 ZNRF2Q8NHG8 242 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 OTOGLQ3ZCN5 2332 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 F5H768 121 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 TM4SF5O14894 197 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 EIF4EBP3O60516 100 aaPredicted RBP7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 IGHV4-39P01824 125 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 IGFBPL1Q8WX77 278 aa7.72□□□□□ -1.17
PDGFRA-207ENST00000509092 TRGV3P03979 118 aa7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 ELANEP08246 267 aa7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 Q0VFX4 171 aa7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 MRGPRG-AS1Q2M3A8 158 aa7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 CEMP1Q6PRD7 247 aaPredicted RBP7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 TPSG1Q9NRR2 321 aa7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 DNAJC13O75165 2243 aa7.71□□□□□ -1.17
PDGFRA-207ENST00000509092 FOLR3P41439 243 aa7.71□□□□□ -1.18
PDGFRA-207ENST00000509092 ZNF672Q499Z4 452 aaPredicted RBP7.71□□□□□ -1.18
PDGFRA-207ENST00000509092 KLK15Q9H2R5 256 aa7.71□□□□□ -1.18
PDGFRA-207ENST00000509092 RIF1Q5UIP0 2472 aaKnown RBP7.71□□□□□ -1.18
PDGFRA-207ENST00000509092 TRAV26-2A0A0B4J265 109 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 IGKV1-17P01599 117 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 RPL27AP46776 148 aaKnown RBP7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 C3orf36Q3SXR2 165 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 GAGE2AQ6NT46 116 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 Q8TAT8 98 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 ARRDC1-AS1Q9H2J1 176 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 TRBV30A0A0K0K1B3 111 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 H7C2G1 150 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 LHBP01229 141 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 CRYGAP11844 174 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 COX7CP15954 63 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 IGHV1-2P23083 117 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 Q1RN00 199 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 GUSBP11Q6P575 273 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 DUX4L9Q6RFH8 374 aaPredicted RBP7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 MRAPQ8TCY5 172 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 LINC00527Q9UJ94 153 aa7.7□□□□□ -1.18
PDGFRA-207ENST00000509092 H7C423 109 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 SPINK14Q6IE38 97 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 DUX3Q96PT4 197 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 METTL26Q96S19 204 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 LYZL6O75951 148 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 ACYP1P07311 99 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 IL11RAQ14626 422 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 SAP25Q8TEE9 199 aa7.69□□□□□ -1.18
PDGFRA-207ENST00000509092 C11orf86A6NJI1 115 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 IGKV3-15P01624 115 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 KIR2DL5BQ8NHK3 375 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 RNF125Q96EQ8 232 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 IGLV4-69A0A075B6H9 119 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 TRAV17A0A0B4J275 112 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 A0A0G2JNJ9 132 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 I3L2K1 104 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 APELAP0DMC3 54 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 PLA2G2CQ5R387 149 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 C2orf66Q6UXQ4 117 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 ZNF491Q8N8L2 437 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 C1orf162Q8NEQ5 155 aaPredicted RBP7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 PRSS33Q8NF86 280 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 GAFA1Q96PS6 74 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 AMELXQ99217 191 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 Q9UFV3 132 aa7.68□□□□□ -1.18
PDGFRA-207ENST00000509092 ZFHX2Q9C0A1 2572 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 CDX4O14627 284 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 OVOL1O14753 267 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 TRIAP1O43715 76 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 ZNF22P17026 224 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 FAM201AQ5SY85 155 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 TTTY12Q9BZ98 90 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 ZNF292O60281 2723 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 C17orf100A8MU93 164 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 DUX5Q96PT3 197 aa7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 ZNF256Q9Y2P7 627 aaPredicted RBP7.67□□□□□ -1.18
PDGFRA-207ENST00000509092 CRYGDP07320 174 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 LINC00643Q86TS7 51 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 C14orf178Q8N769 122 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 C2orf48Q96LS8 159 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 SLC50A1Q9BRV3 221 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 BEX4Q9NWD9 120 aaPredicted RBP7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 UCNP55089 124 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 CFHR4Q92496 578 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 HES7Q9BYE0 225 aa7.66□□□□□ -1.18
PDGFRA-207ENST00000509092 FAM186AA6NE01 2351 aa7.65□□□□□ -1.18
PDGFRA-207ENST00000509092 IGHV4-4A0A075B6R2 117 aa7.65□□□□□ -1.18
PDGFRA-207ENST00000509092 LY6G6EA0A0G2JKS1 128 aa7.65□□□□□ -1.18
PDGFRA-207ENST00000509092 TEX22C9J3V5 150 aa7.65□□□□□ -1.18
PDGFRA-207ENST00000509092 J3QQQ9 107 aa7.65□□□□□ -1.18
PDGFRA-207ENST00000509092 TRACP01848 142 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms