RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 DEFB130AP0DP74 79 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 FAM3BP58499 235 aaPredicted RBP7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 UBE2G2P60604 165 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 ZNF415Q09FC8 603 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 RNF212Q495C1 297 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 DNLZQ5SXM8 178 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 CST9LP1Q5W188 147 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 LYPD6BQ8NI32 183 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 GSN-AS1Q9NRJ2 163 aa7.47□□□□□ -1.21
POLR2J3-213ENST00000508848 hCG_2014768A0A024R1R8 64 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 A0A1B0GVG6 124 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 GCGP01275 180 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 LTAP01374 205 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 BLOC1S1P78537 153 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 TMEM183AQ8IXX5 376 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 C11orf52Q96A22 123 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 SMIM12Q96EX1 92 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 LINC00479Q96M42 142 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 SDF2L1Q9HCN8 221 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 RPH3ALQ9UNE2 315 aa7.46□□□□□ -1.22
POLR2J3-213ENST00000508848 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 ZNF674Q2M3X9 581 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 LCE2CQ5TA81 110 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 Q6ZQT7 251 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 ZNF767PQ75MW2 155 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 Q86TA4 180 aa7.45□□□□□ -1.22
POLR2J3-213ENST00000508848 NACAE9PAV3 2078 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 DNAH1Q9P2D7 4330 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 TRAV34A0A0B4J273 112 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 M0R2P5 195 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 PDE6DO43924 150 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 IFNA1P01562 189 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 UBE2G1P62253 170 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 CCL20P78556 96 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 Q6ZTI0 123 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 C8orf49Q96NF6 230 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 MDFICQ9P1T7 246 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 RYR3Q15413 4870 aa7.44□□□□□ -1.22
POLR2J3-213ENST00000508848 TRGV2A0A075B6R0 118 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 TRGV1A0A0A0MS02 117 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 F5H768 121 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 GNRH2O43555 120 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 GAGE7O76087 117 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 LY6G6CO95867 125 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 CXCL1P09341 107 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 AKR1C3P42330 323 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 MEF2BQ02080 365 aaPredicted RBP7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 MUC21Q5SSG8 566 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 FAM162BQ5T6X4 162 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 TMEM88Q6PEY1 159 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 POM121L12Q8N7R1 296 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 SGK494Q96LW2 274 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 C11orf21Q9P2W6 132 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 VAX2Q9UIW0 290 aa7.43□□□□□ -1.22
POLR2J3-213ENST00000508848 TYMSP04818 313 aa7.42□□□□□ -1.22
POLR2J3-213ENST00000508848 CRIP1P50238 77 aa7.42□□□□□ -1.22
POLR2J3-213ENST00000508848 C9orf85Q96MD7 179 aa7.42□□□□□ -1.22
POLR2J3-213ENST00000508848 IL36BQ9NZH7 164 aa7.42□□□□□ -1.22
POLR2J3-213ENST00000508848 GNG13Q9P2W3 67 aa7.42□□□□□ -1.22
POLR2J3-213ENST00000508848 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
POLR2J3-213ENST00000508848 RYR2Q92736 4967 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 TRAV4A0A0B4J268 109 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 KRBOX1C9JBD0 128 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 BCL2P10415 239 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 ZNF575Q86XF7 245 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 ZC2HC1AQ96GY0 325 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 ALMS1Q8TCU4 4167 aa7.41□□□□□ -1.22
POLR2J3-213ENST00000508848 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 TMEM250H0YL14 139 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 MED14OSP0DP75 135 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 HTN3P15516 51 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 HOXA5P20719 270 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 RPL35P42766 123 aaKnown RBP7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 FHL2Q14192 279 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 LINC01559Q495D7 138 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 BIN3Q9NQY0 253 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 HHLA3Q9XRX5 114 aa7.4□□□□□ -1.22
POLR2J3-213ENST00000508848 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 B4DEV8 164 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 ORM1P02763 201 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 CRYBA4P53673 196 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 OR5I1Q13606 314 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 ZNF876PQ49A33 203 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 ALKAL2Q6UX46 152 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 ZFP2Q6ZN57 461 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 SH2D6Q7Z4S9 175 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 VSIG2Q96IQ7 327 aa7.39□□□□□ -1.23
POLR2J3-213ENST00000508848 SSBP4Q9BWG4 385 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms