RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 SPXQ9BT56 116 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 VAX2Q9UIW0 290 aa10.64□□□□□ -0.71
RNF4-210ENST00000508235 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 LCE6AA0A183 80 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 GAGE12BA1L429 117 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 GAGE7O76087 117 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 GAGE12FP0CL80 117 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 GAGE12GP0CL81 117 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 GAGE12IP0CL82 117 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 C11orf52Q96A22 123 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 NDUFAF3Q9BU61 184 aa10.63□□□□□ -0.71
RNF4-210ENST00000508235 TRGV2A0A075B6R0 118 aa10.62□□□□□ -0.71
RNF4-210ENST00000508235 TRGV1A0A0A0MS02 117 aa10.62□□□□□ -0.71
RNF4-210ENST00000508235 SPINK4O60575 86 aa10.62□□□□□ -0.71
RNF4-210ENST00000508235 Q6ZTI0 123 aa10.62□□□□□ -0.71
RNF4-210ENST00000508235 C18orf15Q96N68 181 aa10.62□□□□□ -0.71
RNF4-210ENST00000508235 F5H768 121 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 TYMSP04818 313 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 FAM162BQ5T6X4 162 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 BAGE2Q86Y30 109 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 LYPD6BQ8NI32 183 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 MDFICQ9P1T7 246 aa10.61□□□□□ -0.71
RNF4-210ENST00000508235 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
RNF4-210ENST00000508235 GNRH2O43555 120 aa10.6□□□□□ -0.71
RNF4-210ENST00000508235 RPL35P42766 123 aaKnown RBP10.6□□□□□ -0.71
RNF4-210ENST00000508235 ZNF674Q2M3X9 581 aa10.6□□□□□ -0.71
RNF4-210ENST00000508235 TEX261Q6UWH6 196 aa10.6□□□□□ -0.71
RNF4-210ENST00000508235 APLNQ9ULZ1 77 aa10.6□□□□□ -0.71
RNF4-210ENST00000508235 M0R2P5 195 aa10.59□□□□□ -0.71
RNF4-210ENST00000508235 C15orf53Q8NAA6 179 aa10.59□□□□□ -0.71
RNF4-210ENST00000508235 RASL10AQ92737 203 aa10.59□□□□□ -0.71
RNF4-210ENST00000508235 SMIM12Q96EX1 92 aa10.59□□□□□ -0.71
RNF4-210ENST00000508235 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
RNF4-210ENST00000508235 MRPL16Q9NX20 251 aaKnown RBP10.59□□□□□ -0.71
RNF4-210ENST00000508235 RBFOX3A6NFN3 312 aa10.58□□□□□ -0.72
RNF4-210ENST00000508235 B4DEV8 164 aa10.58□□□□□ -0.72
RNF4-210ENST00000508235 ORM1P02763 201 aa10.58□□□□□ -0.72
RNF4-210ENST00000508235 LGALS9CQ6DKI2 356 aa10.58□□□□□ -0.72
RNF4-210ENST00000508235 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
RNF4-210ENST00000508235 C11orf21Q9P2W6 132 aa10.58□□□□□ -0.72
RNF4-210ENST00000508235 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 SH2D1AO60880 128 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 LY6G6CO95867 125 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 S100A4P26447 101 aaKnown RBP10.57□□□□□ -0.72
RNF4-210ENST00000508235 ASIPP42127 132 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 GNG4P50150 75 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 CRIP1P50238 77 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 TMEM88Q6PEY1 159 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 NHLRC2Q8NBF2 726 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
RNF4-210ENST00000508235 OR5I1Q13606 314 aa10.56□□□□□ -0.72
RNF4-210ENST00000508235 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
RNF4-210ENST00000508235 CENPWQ5EE01 88 aa10.56□□□□□ -0.72
RNF4-210ENST00000508235 ZNF506Q5JVG8 444 aa10.56□□□□□ -0.72
RNF4-210ENST00000508235 DERL1Q9BUN8 251 aa10.56□□□□□ -0.72
RNF4-210ENST00000508235 BIN3Q9NQY0 253 aa10.56□□□□□ -0.72
RNF4-210ENST00000508235 KRBOX1C9JBD0 128 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 TMEM250H0YL14 139 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 M0R036 132 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 NDUFS6O75380 124 aaKnown RBP10.55□□□□□ -0.72
RNF4-210ENST00000508235 P0DMU3 169 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 FAM231AP0DMU4 169 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 FAM231CP0DMU5 169 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 SLAQ13239 276 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 DNLZQ5SXM8 178 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 PTH2Q96A98 100 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 C9orf85Q96MD7 179 aa10.55□□□□□ -0.72
RNF4-210ENST00000508235 EIF5A2Q9GZV4 153 aaKnown RBP10.55□□□□□ -0.72
RNF4-210ENST00000508235 H3BNG1 76 aa10.54□□□□□ -0.72
RNF4-210ENST00000508235 PRR27Q6MZM9 219 aa10.54□□□□□ -0.72
RNF4-210ENST00000508235 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
RNF4-210ENST00000508235 IL36BQ9NZH7 164 aa10.54□□□□□ -0.72
RNF4-210ENST00000508235 TRAV4A0A0B4J268 109 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 RAB19A4D1S5 217 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 CIDEAO60543 219 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
RNF4-210ENST00000508235 RNASE3P12724 160 aaKnown RBP10.53□□□□□ -0.72
RNF4-210ENST00000508235 HOXA5P20719 270 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 ZNF876PQ49A33 203 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 TOR2AQ5JU69 321 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
RNF4-210ENST00000508235 DAZAP1Q96EP5 407 aaKnown RBP10.53□□□□□ -0.72
RNF4-210ENST00000508235 MUC4Q99102 2169 aa10.52□□□□□ -0.72
RNF4-210ENST00000508235 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
RNF4-210ENST00000508235 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
RNF4-210ENST00000508235 C9JCJ5 164 aa10.52□□□□□ -0.73
RNF4-210ENST00000508235 CXCL1P09341 107 aa10.52□□□□□ -0.73
RNF4-210ENST00000508235 DNAH7Q8WXX0 4024 aa10.52□□□□□ -0.73
RNF4-210ENST00000508235 NUDT3O95989 172 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 SYT8Q8NBV8 401 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 PARLQ9H300 379 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 PRO0255Q9UI72 69 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 TENM2Q9NT68 2774 aa10.51□□□□□ -0.73
RNF4-210ENST00000508235 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 TMSB15BA0A087X1C1 80 aa10.5□□□□□ -0.73
RNF4-210ENST00000508235 A0A0J9YY99 117 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms