RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 OR4X2Q8NGF9 303 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 ATP6V0BQ99437 205 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 NPFFR1Q9GZQ6 430 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 DOPEY1Q5JWR5 2465 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 MYO18BQ8IUG5 2567 aa8.29□□□□□ -1.08
LIN54-207ENST00000508171 A6NDX4 124 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 SOCS3O14543 225 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 EDN2P20800 178 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 TM4SF20Q53R12 229 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 CLEC2AQ6UVW9 174 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 NRGNQ92686 78 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 USP9YO00507 2555 aaPredicted RBP8.28□□□□□ -1.08
LIN54-207ENST00000508171 CD5LO43866 347 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 SRD5A1P18405 259 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 ODF1Q14990 250 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 SMIM15Q7Z3B0 74 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 HHLA3Q9XRX5 114 aa8.28□□□□□ -1.08
LIN54-207ENST00000508171 IGHV4-4A0A075B6R2 117 aa8.27□□□□□ -1.08
LIN54-207ENST00000508171 IGKV2D-26A0A0A0MRZ7 120 aa8.27□□□□□ -1.08
LIN54-207ENST00000508171 LINC00477Q96M19 166 aa8.27□□□□□ -1.08
LIN54-207ENST00000508171 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.08
LIN54-207ENST00000508171 M0R381 172 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 MSMBP08118 114 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 SMIM17P0DL12 118 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 OR4C5Q8NGB2 326 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 OR10J6PQ8NGY7 276 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 RNASE8Q8TDE3 154 aaKnown RBP8.27□□□□□ -1.09
LIN54-207ENST00000508171 USMG5Q96IX5 58 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 MUC4Q99102 2169 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 POLQO75417 2590 aa8.27□□□□□ -1.09
LIN54-207ENST00000508171 TRAV8-6A0A0B4J262 113 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 RNASE4P34096 147 aaKnown RBP8.26□□□□□ -1.09
LIN54-207ENST00000508171 TMEM95Q3KNT9 176 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 FOXC2Q99958 501 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 RHPN1-AS1Q9BWJ2 59 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 ZMAT4Q9H898 229 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 MXRA5Q9NR99 2828 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 A1L4Q6 167 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 C7orf71A4D174 169 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 LENEPQ9Y5L5 61 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 CACNA1AO00555 2505 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 SORL1Q92673 2214 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 NDUFS8O00217 210 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 GNRH2O43555 120 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 LAGE3Q14657 143 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 ADAMTSL5Q6ZMM2 481 aa8.26□□□□□ -1.09
LIN54-207ENST00000508171 OVOL1O14753 267 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 IGLV1-40P01703 118 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 FBN2P35556 2912 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 ANKRD17O75179 2603 aaKnown RBP8.25□□□□□ -1.09
LIN54-207ENST00000508171 TRAV21A0A0B4J279 112 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 TMEM8BA6NDV4 472 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 S100A4P26447 101 aaKnown RBP8.25□□□□□ -1.09
LIN54-207ENST00000508171 C14orf178Q8N769 122 aaPredicted RBP8.25□□□□□ -1.09
LIN54-207ENST00000508171 WFDC12Q8WWY7 111 aa8.25□□□□□ -1.09
LIN54-207ENST00000508171 H3BUA1 57 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 IGKCP01834 107 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 C10orf99Q6UWK7 81 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 GTSCR1Q86UQ5 136 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 TMEM160Q9NX00 188 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 AGRNO00468 2067 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 BRI3O95415 125 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 SEC11AP67812 179 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 OR9G4Q8NGQ1 327 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 FAM19A4Q96LR4 140 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 NAA38Q9BRA0 125 aaKnown RBP8.24□□□□□ -1.09
LIN54-207ENST00000508171 ACACBO00763 2458 aa8.24□□□□□ -1.09
LIN54-207ENST00000508171 SRSF1Q07955 248 aaKnown RBP eCLIP8.23□□□□□ -1.09
LIN54-207ENST00000508171 MYOZ3Q8TDC0 251 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 RASL10AQ92737 203 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 RPL39LQ96EH5 51 aaKnown RBP8.23□□□□□ -1.09
LIN54-207ENST00000508171 DAZ1Q9NQZ3 744 aaKnown RBP8.23□□□□□ -1.09
LIN54-207ENST00000508171 MRPL35Q9NZE8 188 aaKnown RBP8.23□□□□□ -1.09
LIN54-207ENST00000508171 PHLDA3Q9Y5J5 127 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 SIVA1O15304 175 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 ASIPP42127 132 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 CFHR3Q02985 330 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 ZC2HC1BQ5TFG8 222 aa8.23□□□□□ -1.09
LIN54-207ENST00000508171 A0A0G2JLM5 398 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 K7EP13 123 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 DPM2O94777 84 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 IGHV4-59P01825 116 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 RNASE3P12724 160 aaKnown RBP8.22□□□□□ -1.09
LIN54-207ENST00000508171 HSD52Q0P140 79 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 MRAP2Q96G30 205 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 SMIM2Q9BVW6 85 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 PEF1Q9UBV8 284 aaKnown RBP8.22□□□□□ -1.09
LIN54-207ENST00000508171 SMPXQ9UHP9 88 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 ZFYVE26Q68DK2 2539 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 FAM208BQ5VWN6 2430 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 B4DSR2 109 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 ATP5LO75964 103 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 MAPK1IP1LQ8NDC0 245 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 RAB37Q96AX2 223 aa8.22□□□□□ -1.09
LIN54-207ENST00000508171 MGPP08493 103 aa8.21□□□□□ -1.09
LIN54-207ENST00000508171 SUMO2P61956 95 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms