RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 MYH1P12882 1939 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 ARHGAP32A7KAX9 2087 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 USP54Q70EL1 1684 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 TRAV17A0A0B4J275 112 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 H3BRM9 83 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 GEMIN2O14893 280 aaKnown RBP2.38□□□□□ -2.03
LINC01088-203ENST00000507476 IFITM1P13164 125 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 POLR2JP52435 117 aaKnown RBP2.38□□□□□ -2.03
LINC01088-203ENST00000507476 HSD52Q0P140 79 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 PDE6HQ13956 83 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 C1orf137Q5JT78 98 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 SPANXN1Q5VSR9 72 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 FOXI2Q6ZQN5 318 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 TXNDC17Q9BRA2 123 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 KIF13AQ9H1H9 1805 aa2.38□□□□□ -2.03
LINC01088-203ENST00000507476 NRKQ7Z2Y5 1582 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 TRBV6-8A0A0A6YYG3 113 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 TRAV2A0A0B4J234 112 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 A0A1W2PRS3 328 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 FAM24AA6NFZ4 105 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 PITX3O75364 302 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 COX7CP15954 63 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 ZNF833PQ6ZTB9 187 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 Q8TAT8 98 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 PXDNLA1KZ92 1463 aa2.37□□□□□ -2.03
LINC01088-203ENST00000507476 GLI3P10071 1580 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 PIRTP0C851 137 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 S100A10P60903 97 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 NCMAPQ5T1S8 102 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 C12orf73Q69YU5 71 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 TTTY12Q9BZ98 90 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 Q9H521 79 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 KLK9Q9UKQ9 250 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 ABCC10Q5T3U5 1492 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 SEC16AO15027 2179 aa2.36□□□□□ -2.03
LINC01088-203ENST00000507476 RAPGEF2Q9Y4G8 1499 aa2.35□□□□□ -2.03
LINC01088-203ENST00000507476 SPINK8P0C7L1 97 aa2.35□□□□□ -2.03
LINC01088-203ENST00000507476 NPC2P61916 151 aa2.35□□□□□ -2.03
LINC01088-203ENST00000507476 Q6AWC8 147 aa2.35□□□□□ -2.03
LINC01088-203ENST00000507476 FP248Q71RG6 208 aaPredicted RBP2.35□□□□□ -2.03
LINC01088-203ENST00000507476 PPDPFLQ8WWR9 84 aa2.35□□□□□ -2.03
LINC01088-203ENST00000507476 CACNA1DQ01668 2161 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 IL7P13232 177 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 RHOHQ15669 191 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 HCP5Q6MZN7 132 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 ZCCHC23Q6ZST2 131 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 LINC00526Q96FQ7 95 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 AQP10Q96PS8 301 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 AP4S1Q9Y587 144 aa2.34□□□□□ -2.03
LINC01088-203ENST00000507476 AKAP12Q02952 1782 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 KIAA2026Q5HYC2 2103 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 CUL9Q8IWT3 2517 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 MGAMO43451 1857 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 TMEM30CPA0ZSE6 113 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 CCL16O15467 120 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 COL5A1-AS1Q5SY13 56 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 TSKUQ8WUA8 353 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 LINC00052Q96N35 136 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 COL24A1Q17RW2 1714 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 KIDINS220Q9ULH0 1771 aa2.33□□□□□ -2.04
LINC01088-203ENST00000507476 HELZP42694 1942 aaKnown RBP2.32□□□□□ -2.04
LINC01088-203ENST00000507476 BCORL1Q5H9F3 1711 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.32□□□□□ -2.04
LINC01088-203ENST00000507476 P0C880 135 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 CNBPP62633 177 aaKnown RBP2.32□□□□□ -2.04
LINC01088-203ENST00000507476 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 IQCJQ1A5X6 159 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 COA5Q86WW8 74 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 TTC9CQ8N5M4 171 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 TMEM141Q96I45 108 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 COL1A2P08123 1366 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 TROQ12816 1431 aaPredicted RBP2.32□□□□□ -2.04
LINC01088-203ENST00000507476 SCN3AQ9NY46 2000 aa2.32□□□□□ -2.04
LINC01088-203ENST00000507476 AKAP11Q9UKA4 1901 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
LINC01088-203ENST00000507476 C10orf55Q5SWW7 151 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 Q6ZS92 163 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 LINC00299Q6ZSB3 139 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 LSM10Q969L4 123 aaKnown RBP2.31□□□□□ -2.04
LINC01088-203ENST00000507476 CDC42SE1Q9NRR8 79 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 NDUFA12Q9UI09 145 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 SNURFQ9Y675 71 aa2.31□□□□□ -2.04
LINC01088-203ENST00000507476 ALPK3Q96L96 1907 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 GPR179Q6PRD1 2367 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 TCRBV3S1A0A5B6 114 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 IGHV3-33P01772 117 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 GYPBP06028 91 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 SNHG12Q9BXW3 62 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 REG4Q9BYZ8 158 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 PPIP5K1Q6PFW1 1433 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 PRDM2Q13029 1718 aa2.3□□□□□ -2.04
LINC01088-203ENST00000507476 CITO14578 2027 aa2.29□□□□□ -2.04
LINC01088-203ENST00000507476 COL11A1P12107 1806 aaPredicted RBP2.29□□□□□ -2.04
LINC01088-203ENST00000507476 CECR2Q9BXF3 1484 aa2.29□□□□□ -2.04
LINC01088-203ENST00000507476 NSD3Q9BZ95 1437 aa2.29□□□□□ -2.04
LINC01088-203ENST00000507476 TRBV6-5A0A0K0K1A5 114 aa2.29□□□□□ -2.04
LINC01088-203ENST00000507476 J3QRE1 110 aa2.29□□□□□ -2.04
LINC01088-203ENST00000507476 DNAL4O96015 105 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms