RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 C11orf72Q8NBR9 251 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 TMEM263Q8WUH6 116 aaKnown RBP4.07□□□□□ -1.76
USP46-206ENST00000506707 FMC1Q96HJ9 113 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 TXNDC17Q9BRA2 123 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 MLST8Q9BVC4 326 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 C11orf21Q9P2W6 132 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 VAX2Q9UIW0 290 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 TP53TG3Q9ULZ0 132 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 ZFP30Q9Y2G7 519 aa4.07□□□□□ -1.76
USP46-206ENST00000506707 IGHV1OR15-1A0A075B7D0 117 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 TRAV21A0A0B4J279 112 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 RBFOX3A6NFN3 312 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 RGS13O14921 159 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 GNRH2O43555 120 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 GCGP01275 180 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 LTAP01374 205 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 S100A9P06702 114 aaKnown RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 PFN1P07737 140 aaKnown RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 BCL2P10415 239 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 TAGLN2P37802 199 aaKnown RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 AKR1C3P42330 323 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 MEF2BQ02080 365 aaPredicted RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 SMUG1Q53HV7 270 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 MUC21Q5SSG8 566 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 ZFAND6Q6FIF0 208 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 Q6ZTC4 211 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 ZNF767PQ75MW2 155 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 Q86TA4 180 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 PHLDA1Q8WV24 401 aaPredicted RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 PCNPQ8WW12 178 aaKnown RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 C16orf74Q96GX8 76 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 NDFIP1Q9BT67 221 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 DERL1Q9BUN8 251 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 NOP10Q9NPE3 64 aaKnown RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 GSN-AS1Q9NRJ2 163 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 MDFICQ9P1T7 246 aa4.06□□□□□ -1.76
USP46-206ENST00000506707 TIMM8BQ9Y5J9 83 aaPredicted RBP4.06□□□□□ -1.76
USP46-206ENST00000506707 CSMD3Q7Z407 3707 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 IGKV3D-20A0A0C4DH25 116 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 TMEM238LA0A1B0GVL6 79 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 CBY3A6NI87 242 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 FABP5P3A8MUU1 101 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 PDE6DO43924 150 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 IFNA1P01562 189 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 IGLV2-8P01709 118 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 RPL35P42766 123 aaKnown RBP4.05□□□□□ -1.76
USP46-206ENST00000506707 UBE2G1P62253 170 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 IFITM2Q01629 132 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 ZNF674Q2M3X9 581 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 ZNF506Q5JVG8 444 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 IBA57Q5T440 356 aaKnown RBP4.05□□□□□ -1.76
USP46-206ENST00000506707 CEMP1Q6PRD7 247 aaPredicted RBP4.05□□□□□ -1.76
USP46-206ENST00000506707 FAM159AQ6UWV7 190 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 BAGE2Q86Y30 109 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 TMEM183AQ8IXX5 376 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 LINC00612Q8N6U2 182 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 ZC2HC1AQ96GY0 325 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 FAM210AQ96ND0 272 aa4.05□□□□□ -1.76
USP46-206ENST00000506707 DYNC2H1Q8NCM8 4307 aaKnown RBP4.04□□□□□ -1.76
USP46-206ENST00000506707 TRBV20OR9-2A0A075B6H5 130 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 IGHV3-16A0A0C4DH30 117 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 TEX48A0A1B0GUV7 120 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 RAB19A4D1S5 217 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 SPINK4O60575 86 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 DEFB130BP0DP73 79 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 DEFB130AP0DP74 79 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 TCL1AP56279 114 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 DAD1P61803 113 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 NHLRC2Q8NBF2 726 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 MED9Q9NWA0 146 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 NAGKQ9UJ70 344 aa4.04□□□□□ -1.76
USP46-206ENST00000506707 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 TRGV11A0A075B6L2 103 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 DEFB131BA0A096LNP1 70 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 TRAV10A0A0B4J240 114 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 GAGE12BA1L429 117 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 NUPR2A6NF83 97 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 SNURFLB1AK76 121 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 KRBOX1C9JBD0 128 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 C9JQL5 133 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 TMEM250H0YL14 139 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 SH2D1AO60880 128 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 NDUFS6O75380 124 aaKnown RBP4.03□□□□□ -1.76
USP46-206ENST00000506707 GAGE7O76087 117 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 TYMSP04818 313 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 SRP19P09132 144 aaKnown RBP4.03□□□□□ -1.76
USP46-206ENST00000506707 GAGE12FP0CL80 117 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 GAGE12GP0CL81 117 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 GAGE12IP0CL82 117 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 RNASE3P12724 160 aaKnown RBP4.03□□□□□ -1.76
USP46-206ENST00000506707 SRSF3P84103 164 aaKnown RBP4.03□□□□□ -1.76
USP46-206ENST00000506707 LGALS9BQ3B8N2 356 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 CENPWQ5EE01 88 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 TOR2AQ5JU69 321 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 FAM162BQ5T6X4 162 aa4.03□□□□□ -1.76
USP46-206ENST00000506707 Q6ZTI0 123 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms