RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 IGLV2-11P01706 119 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 PPT1P50897 306 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 TCL1AP56279 114 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 TMEM183BQ1AE95 376 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 Q6ZTI0 123 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 SLC51BQ86UW2 128 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 LINC00612Q8N6U2 182 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
TCOF1-209ENST00000506630 TRGV11A0A075B6L2 103 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 FBLL1A6NHQ2 334 aaKnown RBP9.23□□□□□ -0.93
TCOF1-209ENST00000506630 PAGE4O60829 102 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 GCGP01275 180 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 SMUG1Q53HV7 270 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 C9orf62Q8N4C0 152 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 HIST1H2BAQ96A08 127 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 KIAA1109Q2LD37 5005 aa9.23□□□□□ -0.93
TCOF1-209ENST00000506630 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 SPINK4O60575 86 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 RAB5CP51148 216 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 ZNF80P51504 273 aaPredicted RBP9.22□□□□□ -0.93
TCOF1-209ENST00000506630 OR5I1Q13606 314 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 SAPCD1Q5SSQ6 148 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 Q86TA4 180 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 LINC00528Q8N1L1 170 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 SDF2L1Q9HCN8 221 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 MRPL16Q9NX20 251 aaKnown RBP9.22□□□□□ -0.93
TCOF1-209ENST00000506630 MDFICQ9P1T7 246 aa9.22□□□□□ -0.93
TCOF1-209ENST00000506630 TYMSP04818 313 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 P0DMU3 169 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 FAM231AP0DMU4 169 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 FAM231CP0DMU5 169 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 AKR1C3P42330 323 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 SULT1A2P50226 295 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 UBE2G1P62253 170 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 C15orf53Q8NAA6 179 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 TCEAL7Q9BRU2 100 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 FAT2Q9NYQ8 4349 aa9.21□□□□□ -0.94
TCOF1-209ENST00000506630 HECTD4Q9Y4D8 3996 aa9.2□□□□□ -0.94
TCOF1-209ENST00000506630 GNRH2O43555 120 aa9.2□□□□□ -0.94
TCOF1-209ENST00000506630 NUDT3O95989 172 aa9.2□□□□□ -0.94
TCOF1-209ENST00000506630 PFN1P07737 140 aaKnown RBP9.2□□□□□ -0.94
TCOF1-209ENST00000506630 TDRG1Q3Y452 100 aa9.2□□□□□ -0.94
TCOF1-209ENST00000506630 FMC1Q96HJ9 113 aa9.2□□□□□ -0.94
TCOF1-209ENST00000506630 KCNS1Q96KK3 526 aa9.2□□□□□ -0.94
TCOF1-209ENST00000506630 IGHV3-16A0A0C4DH30 117 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 A0A0J9YY99 117 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 TEX46H3BTG2 121 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 HOXA5P20719 270 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 LGALS9BQ3B8N2 356 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 MANBALQ9NQG1 85 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 GNG13Q9P2W3 67 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 DNAH17Q9UFH2 4485 aa9.19□□□□□ -0.94
TCOF1-209ENST00000506630 TRAV26-1A0A087WT03 109 aa9.18□□□□□ -0.94
TCOF1-209ENST00000506630 SCO2A0A1W2PP80 73 aa9.18□□□□□ -0.94
TCOF1-209ENST00000506630 IGHV3-53P01767 116 aa9.18□□□□□ -0.94
TCOF1-209ENST00000506630 NKX2-5P52952 324 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-209ENST00000506630 C18orf15Q96N68 181 aa9.18□□□□□ -0.94
TCOF1-209ENST00000506630 SPXQ9BT56 116 aa9.18□□□□□ -0.94
TCOF1-209ENST00000506630 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
TCOF1-209ENST00000506630 PRSS29PA6NIE9 313 aa9.17□□□□□ -0.94
TCOF1-209ENST00000506630 CCL20P78556 96 aa9.17□□□□□ -0.94
TCOF1-209ENST00000506630 POM121L12Q8N7R1 296 aa9.17□□□□□ -0.94
TCOF1-209ENST00000506630 ZC2HC1AQ96GY0 325 aa9.17□□□□□ -0.94
TCOF1-209ENST00000506630 ZFP30Q9Y2G7 519 aa9.17□□□□□ -0.94
TCOF1-209ENST00000506630 TRAV1-1A0A0B4J248 108 aa9.16□□□□□ -0.94
TCOF1-209ENST00000506630 TRBV6-1A0A0K0K1D8 114 aa9.16□□□□□ -0.94
TCOF1-209ENST00000506630 FABP5P3A8MUU1 101 aa9.16□□□□□ -0.94
TCOF1-209ENST00000506630 M0R2P5 195 aa9.16□□□□□ -0.94
TCOF1-209ENST00000506630 LTAP01374 205 aa9.15□□□□□ -0.94
TCOF1-209ENST00000506630 IFNA1P01562 189 aa9.15□□□□□ -0.94
TCOF1-209ENST00000506630 SFTA3P0C7M3 94 aa9.15□□□□□ -0.94
TCOF1-209ENST00000506630 ALKAL2Q6UX46 152 aa9.15□□□□□ -0.94
TCOF1-209ENST00000506630 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
TCOF1-209ENST00000506630 RASL10AQ92737 203 aa9.15□□□□□ -0.94
TCOF1-209ENST00000506630 IGKV3D-20A0A0C4DH25 116 aa9.14□□□□□ -0.95
TCOF1-209ENST00000506630 B4DEV8 164 aa9.14□□□□□ -0.95
TCOF1-209ENST00000506630 SH2D1AO60880 128 aa9.14□□□□□ -0.95
TCOF1-209ENST00000506630 ORM1P02763 201 aa9.14□□□□□ -0.95
TCOF1-209ENST00000506630 S100A9P06702 114 aaKnown RBP9.14□□□□□ -0.95
TCOF1-209ENST00000506630 S100A4P26447 101 aaKnown RBP9.14□□□□□ -0.95
TCOF1-209ENST00000506630 FAM162BQ5T6X4 162 aa9.14□□□□□ -0.95
TCOF1-209ENST00000506630 TRAV4A0A0B4J268 109 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 C9JCJ5 164 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 M0R036 132 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 RNF212Q495C1 297 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 OR4C5Q8NGB2 326 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 ZNF479Q96JC4 524 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 C9orf85Q96MD7 179 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 TXNDC17Q9BRA2 123 aa9.13□□□□□ -0.95
TCOF1-209ENST00000506630 RYR1P21817 5038 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
TCOF1-209ENST00000506630 RTL8CO15255 209 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms