RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 CLEC5AQ9NY25 188 aa9.17□□□□□ -0.94
LIN54-206ENST00000506560 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
LIN54-206ENST00000506560 SMKR1H3BMG3 65 aa9.17□□□□□ -0.94
LIN54-206ENST00000506560 ZNF324O75467 553 aaPredicted RBP9.17□□□□□ -0.94
LIN54-206ENST00000506560 KLF5Q13887 457 aaPredicted RBP9.17□□□□□ -0.94
LIN54-206ENST00000506560 LINC01559Q495D7 138 aa9.17□□□□□ -0.94
LIN54-206ENST00000506560 RNF152Q8N8N0 203 aa9.17□□□□□ -0.94
LIN54-206ENST00000506560 FOXC2Q99958 501 aa9.17□□□□□ -0.94
LIN54-206ENST00000506560 OR8A1Q8NGG7 326 aa9.16□□□□□ -0.94
LIN54-206ENST00000506560 UFC1Q9Y3C8 167 aa9.16□□□□□ -0.94
LIN54-206ENST00000506560 JMJD1CQ15652 2540 aa9.16□□□□□ -0.94
LIN54-206ENST00000506560 CTRLP40313 264 aa9.16□□□□□ -0.94
LIN54-206ENST00000506560 TWIST1Q15672 202 aa9.16□□□□□ -0.94
LIN54-206ENST00000506560 OR11H1Q8NG94 326 aa9.16□□□□□ -0.94
LIN54-206ENST00000506560 C2orf70A6NJV1 201 aa9.15□□□□□ -0.94
LIN54-206ENST00000506560 CD5LO43866 347 aa9.15□□□□□ -0.94
LIN54-206ENST00000506560 IGKV3-20P01619 116 aa9.15□□□□□ -0.94
LIN54-206ENST00000506560 OR10AG1Q8NH19 301 aa9.15□□□□□ -0.94
LIN54-206ENST00000506560 TMEM208Q9BTX3 173 aa9.15□□□□□ -0.94
LIN54-206ENST00000506560 TIMM8BQ9Y5J9 83 aaPredicted RBP9.15□□□□□ -0.94
LIN54-206ENST00000506560 NOTCH3Q9UM47 2321 aa9.15□□□□□ -0.94
LIN54-206ENST00000506560 NCR2O95944 276 aa9.15□□□□□ -0.95
LIN54-206ENST00000506560 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.95
LIN54-206ENST00000506560 OR10J6PQ8NGY7 276 aa9.15□□□□□ -0.95
LIN54-206ENST00000506560 A0A1W2PRX2 142 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 D6R8Y8 96 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 PSMG4Q5JS54 123 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 LINC00173Q6ZV60 143 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 NPSP0C0P6 89 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 C3orf79P0CE67 100 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 RNASE4P34096 147 aaKnown RBP9.14□□□□□ -0.95
LIN54-206ENST00000506560 Q6AWC8 147 aa9.14□□□□□ -0.95
LIN54-206ENST00000506560 HIVEP1P15822 2718 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 OVOL1O14753 267 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 HSBP1O75506 76 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 MRPL51Q4U2R6 128 aaKnown RBP9.13□□□□□ -0.95
LIN54-206ENST00000506560 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 ATOH7Q8N100 152 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 GATD1Q8NB37 220 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 KLHL30-AS1Q8NEE0 82 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 BORCS7Q96B45 105 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 MUC4Q99102 2169 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 FLNBO75369 2602 aaKnown RBP9.13□□□□□ -0.95
LIN54-206ENST00000506560 H3BVH4 76 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 SPATA45Q537H7 98 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
LIN54-206ENST00000506560 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
LIN54-206ENST00000506560 LOC389332A0A1B0GUA5 103 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 DLEU1O43261 78 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 GATA1P15976 413 aaPredicted RBP9.12□□□□□ -0.95
LIN54-206ENST00000506560 FXYD7P58549 80 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 PPP1R14DQ9NXH3 145 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
LIN54-206ENST00000506560 MAJINQ3KP22 176 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 EBLN2Q6P2I7 272 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 RNF185Q96GF1 192 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 K7EQG2 157 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 M0R2Z0 102 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 LGALS9O00182 355 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 GNRH2O43555 120 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 CD28P10747 220 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 EVI2AP22794 236 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
LIN54-206ENST00000506560 C2CD3Q4AC94 2353 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
LIN54-206ENST00000506560 TRAV12-2A0A075B6T6 113 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 TMEM86BQ8N661 226 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 LINC01619G3V211 115 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 NPYP01303 97 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 IFI27P40305 119 aaPredicted RBP9.11□□□□□ -0.95
LIN54-206ENST00000506560 OR1N2Q8NGR9 330 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 CNFNQ9BYD5 112 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 GOLT1BQ9Y3E0 138 aa9.11□□□□□ -0.95
LIN54-206ENST00000506560 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
LIN54-206ENST00000506560 C4orf3Q8WVX3 66 aa9.1□□□□□ -0.95
LIN54-206ENST00000506560 MCRIP2Q9BUT9 160 aaKnown RBP9.1□□□□□ -0.95
LIN54-206ENST00000506560 TRAV26-2A0A0B4J265 109 aa9.1□□□□□ -0.95
LIN54-206ENST00000506560 LINC00614P0C842 121 aa9.1□□□□□ -0.95
LIN54-206ENST00000506560 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
LIN54-206ENST00000506560 A0A1B0GW15 77 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 TMEM61Q8N0U2 210 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 PRELID3AQ96N28 172 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 ID1P41134 155 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 Q6ZN92 141 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 STPG4Q8N801 248 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 LINC01006Q8NI28 216 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 DPF1Q92782 380 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 RAX2Q96IS3 184 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 CITED2Q99967 270 aaPredicted RBP9.09□□□□□ -0.95
LIN54-206ENST00000506560 LENEPQ9Y5L5 61 aa9.09□□□□□ -0.95
LIN54-206ENST00000506560 TRAV12-3A0A0B4J271 114 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 OR9G4Q8NGQ1 327 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 TMEM191AQ9H0A3 160 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
LIN54-206ENST00000506560 A0A0J9YX75 114 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms