RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 C9JCJ5 164 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 SLC25A5P05141 298 aaKnown RBP4.45□□□□□ -1.7
VCAN-206ENST00000505615 SNRPCP09234 159 aaKnown RBP4.45□□□□□ -1.7
VCAN-206ENST00000505615 S100A7P31151 101 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 OR10J3Q5JRS4 329 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 LCN15Q6UWW0 184 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 ACOT7LQ6ZUV0 252 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 SH2D6Q7Z4S9 175 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 OR10P1Q8NGE3 313 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 FAM19A4Q96LR4 140 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 SLC50A1Q9BRV3 221 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 SRRQ9GZT4 340 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 NAA60Q9H7X0 242 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 CACFD1Q9UGQ2 172 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 URGCP-MRPS24S4R325 110 aa4.45□□□□□ -1.7
VCAN-206ENST00000505615 TRAV8-3A0A0A6YYJ7 113 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 A0A0J9YXV3 536 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 hDV102S1A0JD36 115 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 FABP12A6NFH5 140 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 HYPMO75409 117 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 AQP4P55087 323 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 SMCO1Q147U7 214 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 PRR9Q5T870 116 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 PATE2Q6UY27 113 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 ZNF546Q86UE3 836 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 SNX29P2Q8IUI4 249 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 SAMD12Q8N8I0 201 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 OR4D10Q8NGI6 311 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 ATP6V0E2Q8NHE4 81 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 ZFAND1Q8TCF1 268 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 DNAJC30Q96LL9 226 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 RTBDNQ9BSG5 229 aaPredicted RBP4.44□□□□□ -1.7
VCAN-206ENST00000505615 MAP1LC3CQ9BXW4 147 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 VCX3AQ9NNX9 186 aa4.44□□□□□ -1.7
VCAN-206ENST00000505615 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 TRAV4A0A0B4J268 109 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 A0A0U1RQV1 116 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 CRYM-AS1A6NIL9 109 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 MPDU1O75352 247 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 ATP5LO75964 103 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 CD3DP04234 171 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 OR4E1P0C645 316 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 LINC00869P0C866 280 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 IAPPP10997 89 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 GATA1P15976 413 aaPredicted RBP4.43□□□□□ -1.7
VCAN-206ENST00000505615 CRISP2P16562 243 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 CCR6P51684 374 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 ERCC8Q13216 396 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 RNASE10Q5GAN6 216 aaKnown RBP4.43□□□□□ -1.7
VCAN-206ENST00000505615 CYP2G1PQ6ZSU1 146 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 DAZ4Q86SG3 579 aaKnown RBP4.43□□□□□ -1.7
VCAN-206ENST00000505615 ZFAND2AQ8N6M9 145 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 TERB2Q8NHR7 220 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 RASL10AQ92737 203 aa4.43□□□□□ -1.7
VCAN-206ENST00000505615 DAZ3Q9NR90 486 aaKnown RBP4.43□□□□□ -1.7
VCAN-206ENST00000505615 SMLR1H3BR10 107 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 PITX3O75364 302 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 TNFAIP8O95379 198 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 OR5G3P0C626 314 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 IGLC2P0DOY2 106 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 RNASE4P34096 147 aaKnown RBP4.42□□□□□ -1.7
VCAN-206ENST00000505615 TGFBR1P36897 503 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 CEBPGP53567 150 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 AKR1C1Q04828 323 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 ENKURQ8TC29 256 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 VCXQ9H320 206 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 PXMP4Q9Y6I8 212 aa4.42□□□□□ -1.7
VCAN-206ENST00000505615 A0A0D9SG52 128 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 H3BQ15 152 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 SNAI2O43623 268 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 IL5P05113 134 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 CIRBPQ14011 172 aaKnown RBP4.41□□□□□ -1.7
VCAN-206ENST00000505615 SCGB2B2Q4G0G5 96 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 LYZL2Q7Z4W2 148 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 HSD17B11Q8NBQ5 300 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 ISOC2Q96AB3 205 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 ARV1Q9H2C2 271 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 CRCT1Q9UGL9 99 aa4.41□□□□□ -1.7
VCAN-206ENST00000505615 PAIP2BQ9ULR5 123 aaKnown RBP4.41□□□□□ -1.7
VCAN-206ENST00000505615 FSIP2Q5CZC0 6907 aa4.4□□□□□ -1.7
VCAN-206ENST00000505615 IGKV2D-24A0A075B6R9 120 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 TRAV8-1A0A0A6YYK1 113 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 A0A0B4J2A0 478 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 IGHV3-16A0A0C4DH30 117 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 M0R3E3 92 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 PFN1P07737 140 aaKnown RBP4.4□□□□□ -1.71
VCAN-206ENST00000505615 TBPP20226 339 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 GABARAPL2P60520 117 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 POLR2GP62487 172 aaKnown RBP eCLIP4.4□□□□□ -1.71
VCAN-206ENST00000505615 GAGE1Q13065 139 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 GAGE4Q13068 117 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 ARL6Q9H0F7 186 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 GTSF1LQ9H1H1 148 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 DPH3P1Q9H4G8 78 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 SHPKQ9UHJ6 478 aa4.4□□□□□ -1.71
VCAN-206ENST00000505615 C14orf166Q9Y224 244 aaKnown RBP4.4□□□□□ -1.71
VCAN-206ENST00000505615 GGTLC3B5MD39 225 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms