RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MRPS12O15235 138 aaKnown RBP6.72□□□□□ -1.33
NEDD9-210ENST00000505589 H2AFB1P0C5Y9 115 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 CT45A10P0DMU9 189 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 SRIP30626 198 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 CRYBA4P53673 196 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 ZNF726P1Q15940 193 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 GCSAMLQ5JQS6 135 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 FAM122CQ6P4D5 195 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 ACTR3CQ9C0K3 210 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-210ENST00000505589 GSN-AS1Q9NRJ2 163 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 PRELID1Q9Y255 219 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 TNFRSF18Q9Y5U5 241 aa6.72□□□□□ -1.33
NEDD9-210ENST00000505589 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 C7orf71A4D174 169 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 MAP1LC3B2A6NCE7 125 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 TEX46H3BTG2 121 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 J3KRW8 73 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 COX7A2P2O60397 106 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 ZNF253O75346 499 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 GPX1P07203 203 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 CRYGDP07320 174 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 FUSP35637 526 aaKnown RBP eCLIP6.71□□□□□ -1.34
NEDD9-210ENST00000505589 CDC34P49427 236 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-210ENST00000505589 TCL1AP56279 114 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 ZNF415Q09FC8 603 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 KIR3DS1Q14943 382 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 C10orf113Q5VZT2 155 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 IQCF2Q8IXL9 164 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 SLC7A5P1Q8MH63 180 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 OR1L4Q8NGR5 311 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 SFT2D1Q8WV19 159 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 MBD3L1Q8WWY6 194 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 MRPL53Q96EL3 112 aaKnown RBP6.71□□□□□ -1.34
NEDD9-210ENST00000505589 PFDN5Q99471 154 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 VGLL1Q99990 258 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 MAP1LC3BQ9GZQ8 125 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 DNAJC4Q9NNZ3 241 aa6.71□□□□□ -1.34
NEDD9-210ENST00000505589 PATE2Q6UY27 113 aa6.7□□□□□ -1.34
NEDD9-210ENST00000505589 C11orf72Q8NBR9 251 aa6.7□□□□□ -1.34
NEDD9-210ENST00000505589 RAB24Q969Q5 203 aa6.7□□□□□ -1.34
NEDD9-210ENST00000505589 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
NEDD9-210ENST00000505589 FLG2Q5D862 2391 aaPredicted RBP6.69□□□□□ -1.34
NEDD9-210ENST00000505589 A0A1B0GV50 99 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 A0A1W2PPV4 95 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 RAB19A4D1S5 217 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 KLLNB2CW77 178 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 C9JCJ5 164 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 K7EQD1 137 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 ATP6V1G1O75348 118 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 HIST1H1EP10412 219 aaKnown RBP6.69□□□□□ -1.34
NEDD9-210ENST00000505589 FHL2Q14192 279 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 TMEM37Q8WXS4 190 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 TM2D2Q9BX73 214 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 KLF12Q9Y4X4 402 aa6.69□□□□□ -1.34
NEDD9-210ENST00000505589 IGHV3-38A0A0C4DH36 116 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 PRAC2D3DTV9 90 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 HMGB3O15347 200 aaKnown RBP6.68□□□□□ -1.34
NEDD9-210ENST00000505589 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.34
NEDD9-210ENST00000505589 OXTP01178 125 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 STAG3L2P0CL84 134 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 STAG3L3P0CL85 134 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 ARL14EPLP0DKL9 152 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-210ENST00000505589 RNASE4P34096 147 aaKnown RBP6.68□□□□□ -1.34
NEDD9-210ENST00000505589 FGF8P55075 233 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-210ENST00000505589 CCL20P78556 96 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 PDE6HQ13956 83 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 KHDC3LQ587J8 217 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 TMEM78Q5T7P6 136 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 UQCC3Q6UW78 93 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 MIR17HGQ75NE6 70 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 Q8N814 137 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 SPXQ9BT56 116 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 AAMDCQ9H7C9 122 aa6.68□□□□□ -1.34
NEDD9-210ENST00000505589 IGHV1OR15-1A0A075B7D0 117 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 TRAV8-6A0A0B4J262 113 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 TRBV7-9A0A0J9YWB2 115 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 CXorf1O96002 111 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 IFNA1P01562 189 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 IGHV3-53P01767 116 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 PPT1P50897 306 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 TIRAPP58753 221 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 TAS2R45P59539 299 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 MORN5Q5VZ52 161 aa6.67□□□□□ -1.34
NEDD9-210ENST00000505589 DNAH8Q96JB1 4490 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 LRCOL1A6NCL2 159 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 IBA57-AS1B1ANH7 110 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 CIDEAO60543 219 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 PFN1P07737 140 aaKnown RBP6.66□□□□□ -1.34
NEDD9-210ENST00000505589 BCL2P10415 239 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 GYPEP15421 78 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 CRISP2P16562 243 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 TAGLN2P37802 199 aaKnown RBP6.66□□□□□ -1.34
NEDD9-210ENST00000505589 LINC01559Q495D7 138 aa6.66□□□□□ -1.34
NEDD9-210ENST00000505589 TOR2AQ5JU69 321 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms