RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TREM1Q9NP99 234 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 DNAH5Q8TE73 4624 aa13.6□□□□□ -0.23
UBE2D3-220ENST00000505307 IGHV3-16A0A0C4DH30 117 aa13.59□□□□□ -0.23
UBE2D3-220ENST00000505307 NDFIP1Q9BT67 221 aa13.59□□□□□ -0.23
UBE2D3-220ENST00000505307 SDF2L1Q9HCN8 221 aa13.59□□□□□ -0.23
UBE2D3-220ENST00000505307 APOBP04114 4563 aaKnown RBP13.58□□□□□ -0.23
UBE2D3-220ENST00000505307 GNRH2O43555 120 aa13.58□□□□□ -0.24
UBE2D3-220ENST00000505307 RAB2AP61019 212 aa13.58□□□□□ -0.24
UBE2D3-220ENST00000505307 SCRT2Q9NQ03 307 aa13.58□□□□□ -0.24
UBE2D3-220ENST00000505307 EIF3GO75821 320 aaKnown RBP eCLIP13.57□□□□□ -0.246e-9■■■■□ 22.8
UBE2D3-220ENST00000505307 DNAH10OSP0CZ25 163 aa13.57□□□□□ -0.24
UBE2D3-220ENST00000505307 C10orf126Q8N4M7 172 aa13.57□□□□□ -0.24
UBE2D3-220ENST00000505307 OR2G3Q8NGZ4 309 aa13.57□□□□□ -0.24
UBE2D3-220ENST00000505307 MSRB1Q9NZV6 116 aa13.57□□□□□ -0.24
UBE2D3-220ENST00000505307 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
UBE2D3-220ENST00000505307 TRAV8-1A0A0A6YYK1 113 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 K7EQM0 130 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 CIDEAO60543 219 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 TYMSP04818 313 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 CDC34P49427 236 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 TIRAPP58753 221 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 C5orf17Q8NAS9 161 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 ASB13Q8WXK3 278 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 TVP23CQ96ET8 276 aa13.56□□□□□ -0.24
UBE2D3-220ENST00000505307 F6UZH7 168 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 MBP02144 154 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 STAG3L2P0CL84 134 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 STAG3L3P0CL85 134 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 ARL14EPLP0DKL9 152 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 WFDC10BQ8IUB3 73 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 PSMG3Q9BT73 122 aaPredicted RBP13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 TNFRSF18Q9Y5U5 241 aa13.55□□□□□ -0.24
UBE2D3-220ENST00000505307 HMGB3O15347 200 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-220ENST00000505307 GATA1P15976 413 aaPredicted RBP13.54□□□□□ -0.24
UBE2D3-220ENST00000505307 GNG5P63218 68 aa13.54□□□□□ -0.24
UBE2D3-220ENST00000505307 SERF2P84101 59 aa13.54□□□□□ -0.24
UBE2D3-220ENST00000505307 SUN5Q8TC36 379 aa13.54□□□□□ -0.24
UBE2D3-220ENST00000505307 A0A087WTM6 91 aa13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 FBLL1A6NHQ2 334 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 TAAR5O14804 337 aa13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 TCRAP04437 139 aa13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 RAB24Q969Q5 203 aa13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 AQP10Q96PS8 301 aa13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 ALG5Q9Y673 324 aa13.53□□□□□ -0.24
UBE2D3-220ENST00000505307 CRYGDP07320 174 aa13.52□□□□□ -0.25
UBE2D3-220ENST00000505307 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.25
UBE2D3-220ENST00000505307 GCHFRP30047 84 aa13.52□□□□□ -0.25
UBE2D3-220ENST00000505307 NHLRC2Q8NBF2 726 aa13.52□□□□□ -0.25
UBE2D3-220ENST00000505307 HSD17B11Q8NBQ5 300 aa13.52□□□□□ -0.25
UBE2D3-220ENST00000505307 TMEM167BQ9NRX6 74 aa13.52□□□□□ -0.25
UBE2D3-220ENST00000505307 ZNF876PQ49A33 203 aa13.51□□□□□ -0.25
UBE2D3-220ENST00000505307 CXorf1O96002 111 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 ATP6V0CP27449 155 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 PPT1P50897 306 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 ZFP69Q49AA0 526 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 PTH2Q96A98 100 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 PRADC1Q9BSG0 188 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 MED28Q9H204 178 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 BATF3Q9NR55 127 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 TNFSF18Q9UNG2 199 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 PSG8Q9UQ74 426 aa13.5□□□□□ -0.25
UBE2D3-220ENST00000505307 IGHV3-38A0A0C4DH36 116 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 TRBV6-4A0A1B0GX49 114 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 RS1O15537 224 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 GCGP01275 180 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 FUSP35637 526 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 SUMO1P63165 101 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 FLI1Q01543 452 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 RHOHQ15669 191 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 SAPCD1Q5SSQ6 148 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 SGK494Q96LW2 274 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 ACTR3CQ9C0K3 210 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 EPDR1Q9UM22 224 aa13.49□□□□□ -0.25
UBE2D3-220ENST00000505307 TRAV8-6A0A0B4J262 113 aa13.48□□□□□ -0.25
UBE2D3-220ENST00000505307 LOC100131303A0A0U1RQF7 123 aa13.48□□□□□ -0.25
UBE2D3-220ENST00000505307 PTTG1O95997 202 aa13.48□□□□□ -0.25
UBE2D3-220ENST00000505307 CFAP126Q5VTH2 177 aa13.48□□□□□ -0.25
UBE2D3-220ENST00000505307 CYB561D1Q8N8Q1 229 aa13.48□□□□□ -0.25
UBE2D3-220ENST00000505307 SLC25A29Q8N8R3 303 aa13.48□□□□□ -0.25
UBE2D3-220ENST00000505307 EPM2AB3EWF7 344 aa13.47□□□□□ -0.25
UBE2D3-220ENST00000505307 ZNF80P51504 273 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-220ENST00000505307 LINC01556Q5JQF7 62 aa13.47□□□□□ -0.25
UBE2D3-220ENST00000505307 TMEM75Q8N9X5 138 aa13.47□□□□□ -0.25
UBE2D3-220ENST00000505307 C9orf85Q96MD7 179 aa13.47□□□□□ -0.25
UBE2D3-220ENST00000505307 C11orf21Q9P2W6 132 aa13.47□□□□□ -0.25
UBE2D3-220ENST00000505307 IGLV2-11P01706 119 aa13.46□□□□□ -0.25
UBE2D3-220ENST00000505307 INO80EQ8NBZ0 244 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-220ENST00000505307 A0A1W2PRE2 83 aa13.45□□□□□ -0.26
UBE2D3-220ENST00000505307 GGTLC3B5MD39 225 aa13.45□□□□□ -0.26
UBE2D3-220ENST00000505307 MGST1P10620 155 aaKnown RBP13.45□□□□□ -0.26
UBE2D3-220ENST00000505307 PRNTQ86SH4 94 aa13.45□□□□□ -0.26
UBE2D3-220ENST00000505307 SH3BGRL3Q9H299 93 aa13.45□□□□□ -0.26
UBE2D3-220ENST00000505307 IBA57-AS1B1ANH7 110 aa13.44□□□□□ -0.26
UBE2D3-220ENST00000505307 PSCAO43653 123 aa13.44□□□□□ -0.26
UBE2D3-220ENST00000505307 GIPP09681 153 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-220ENST00000505307 OR10J3Q5JRS4 329 aa13.44□□□□□ -0.26
UBE2D3-220ENST00000505307 PIK3CD-AS1Q5SR53 167 aa13.44□□□□□ -0.26
UBE2D3-220ENST00000505307 DPPA3Q6W0C5 159 aa13.44□□□□□ -0.26
UBE2D3-220ENST00000505307 BORCS7-ASMTA0A0B4J1R7 106 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms