RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 LY96Q9Y6Y9 160 aa8.91□□□□□ -0.98
SNCA-208ENST00000505199 CXCL1P09341 107 aa8.9□□□□□ -0.98
SNCA-208ENST00000505199 ZNF80P51504 273 aaPredicted RBP8.9□□□□□ -0.98
SNCA-208ENST00000505199 LINC01559Q495D7 138 aa8.9□□□□□ -0.98
SNCA-208ENST00000505199 CLLU1Q5K131 121 aa8.9□□□□□ -0.98
SNCA-208ENST00000505199 PTH2Q96A98 100 aa8.9□□□□□ -0.98
SNCA-208ENST00000505199 ZC2HC1AQ96GY0 325 aa8.9□□□□□ -0.98
SNCA-208ENST00000505199 TRAV10A0A0B4J240 114 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 DEFB4AO15263 64 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 PEA15Q15121 130 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 FAM74A3Q4VXF1 159 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 CENPWQ5EE01 88 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 TOR2AQ5JU69 321 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 RASL10AQ92737 203 aa8.89□□□□□ -0.99
SNCA-208ENST00000505199 KLK5Q9Y337 293 aaPredicted RBP8.89□□□□□ -0.99
SNCA-208ENST00000505199 CIDEAO60543 219 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 SPINK4O60575 86 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 CRIP1P50238 77 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 EMP1P54849 157 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 DAD1P61803 113 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 CASC10Q5T4H9 136 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 DERL1Q9BUN8 251 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
SNCA-208ENST00000505199 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
SNCA-208ENST00000505199 TRBV20OR9-2A0A075B6H5 130 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 IGHV3-16A0A0C4DH30 117 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 SH2D1AO60880 128 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 IGLV2-8P01709 118 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 TYMSP04818 313 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 MED14OSP0DP75 135 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 NANOS2P60321 138 aaKnown RBP8.87□□□□□ -0.99
SNCA-208ENST00000505199 MUC21Q5SSG8 566 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
SNCA-208ENST00000505199 PHLDA1Q8WV24 401 aaPredicted RBP8.87□□□□□ -0.99
SNCA-208ENST00000505199 PARLQ9H300 379 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 GSN-AS1Q9NRJ2 163 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 IL36BQ9NZH7 164 aa8.87□□□□□ -0.99
SNCA-208ENST00000505199 IGKV3D-20A0A0C4DH25 116 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 KRBOX1C9JBD0 128 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 M0R2P5 195 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 PRM2P04554 102 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 ATP5G1P05496 136 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 Q6ZQT7 251 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 Q6ZTC4 211 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 C9orf85Q96MD7 179 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 C11orf21Q9P2W6 132 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 NAGKQ9UJ70 344 aa8.86□□□□□ -0.99
SNCA-208ENST00000505199 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
SNCA-208ENST00000505199 B4DEV8 164 aa8.85□□□□□ -0.99
SNCA-208ENST00000505199 ORM1P02763 201 aa8.85□□□□□ -0.99
SNCA-208ENST00000505199 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
SNCA-208ENST00000505199 ASIPP42127 132 aa8.85□□□□□ -0.99
SNCA-208ENST00000505199 RPS20P60866 119 aaKnown RBP8.85□□□□□ -0.99
SNCA-208ENST00000505199 IFITM2Q01629 132 aa8.85□□□□□ -0.99
SNCA-208ENST00000505199 DAZAP1Q96EP5 407 aaKnown RBP8.85□□□□□ -0.99
SNCA-208ENST00000505199 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
SNCA-208ENST00000505199 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 C19orf71A6NCJ1 209 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 H3BNG1 76 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 RNASE3P12724 160 aaKnown RBP8.84□□□□□ -0.99
SNCA-208ENST00000505199 SLAQ13239 276 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 UQCC3Q6UW78 93 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 SMIM7Q9BQ49 75 aa8.84□□□□□ -0.99
SNCA-208ENST00000505199 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
SNCA-208ENST00000505199 ZNF727A8MUV8 499 aa8.83□□□□□ -1
SNCA-208ENST00000505199 GNRH2O43555 120 aa8.83□□□□□ -1
SNCA-208ENST00000505199 OR5AL1P0C617 328 aa8.83□□□□□ -1
SNCA-208ENST00000505199 DEFB130BP0DP73 79 aa8.83□□□□□ -1
SNCA-208ENST00000505199 DEFB130AP0DP74 79 aa8.83□□□□□ -1
SNCA-208ENST00000505199 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
SNCA-208ENST00000505199 NHLRC2Q8NBF2 726 aa8.83□□□□□ -1
SNCA-208ENST00000505199 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
SNCA-208ENST00000505199 SCRT2Q9NQ03 307 aa8.83□□□□□ -1
SNCA-208ENST00000505199 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
SNCA-208ENST00000505199 P01737 135 aa8.82□□□□□ -1
SNCA-208ENST00000505199 MGST1P10620 155 aaKnown RBP8.82□□□□□ -1
SNCA-208ENST00000505199 CT83Q5H943 113 aa8.82□□□□□ -1
SNCA-208ENST00000505199 Q6ZTI0 123 aa8.82□□□□□ -1
SNCA-208ENST00000505199 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
SNCA-208ENST00000505199 OCC1Q8TAD7 63 aa8.82□□□□□ -1
SNCA-208ENST00000505199 DNAH7Q8WXX0 4024 aa8.82□□□□□ -1
SNCA-208ENST00000505199 MUC4Q99102 2169 aa8.81□□□□□ -1
SNCA-208ENST00000505199 A0A1W2PPQ1 181 aa8.81□□□□□ -1
SNCA-208ENST00000505199 A8MWV9 139 aa8.81□□□□□ -1
SNCA-208ENST00000505199 OR5I1Q13606 314 aa8.81□□□□□ -1
SNCA-208ENST00000505199 ZNF876PQ49A33 203 aa8.81□□□□□ -1
SNCA-208ENST00000505199 SOHLH1Q5JUK2 328 aa8.81□□□□□ -1
SNCA-208ENST00000505199 PRR27Q6MZM9 219 aa8.81□□□□□ -1
SNCA-208ENST00000505199 LINC01551Q86U37 167 aa8.81□□□□□ -1
SNCA-208ENST00000505199 ZNF575Q86XF7 245 aa8.81□□□□□ -1
SNCA-208ENST00000505199 SYT8Q8NBV8 401 aa8.81□□□□□ -1
SNCA-208ENST00000505199 PCNPQ8WW12 178 aaKnown RBP8.81□□□□□ -1
SNCA-208ENST00000505199 CSMD3Q7Z407 3707 aa8.8□□□□□ -1
SNCA-208ENST00000505199 TRAV4A0A0B4J268 109 aa8.8□□□□□ -1
SNCA-208ENST00000505199 GAGE12BA1L429 117 aa8.8□□□□□ -1
SNCA-208ENST00000505199 FAM231BA6NCW3 169 aa8.8□□□□□ -1
SNCA-208ENST00000505199 F2Z2F3 143 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms