RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	CRYGD	P07320	174 aa		11.19	□□□□□ -0.62
DDR1-256	ENST00000505066	PFN1	P07737	140 aa	Known RBP	11.19	□□□□□ -0.62
DDR1-256	ENST00000505066	ASB13	Q8WXK3	278 aa		11.19	□□□□□ -0.62
DDR1-256	ENST00000505066	MARVELD1	Q9BSK0	173 aa		11.19	□□□□□ -0.62
DDR1-256	ENST00000505066	H2BFS	P57053	126 aa		11.18	□□□□□ -0.62
DDR1-256	ENST00000505066	TDRG1	Q3Y452	100 aa		11.18	□□□□□ -0.62
DDR1-256	ENST00000505066	OR10G9	Q8NGN4	311 aa		11.18	□□□□□ -0.62
DDR1-256	ENST00000505066	OR10G7	Q8NGN6	311 aa		11.18	□□□□□ -0.62
DDR1-256	ENST00000505066	FRZB	Q92765	325 aa		11.18	□□□□□ -0.62
DDR1-256	ENST00000505066	KRTAP4-5	Q9BYR2	181 aa		11.18	□□□□□ -0.62
DDR1-256	ENST00000505066	FBLL1	A6NHQ2	334 aa	Known RBP	11.17	□□□□□ -0.62
DDR1-256	ENST00000505066	MB	P02144	154 aa		11.17	□□□□□ -0.62
DDR1-256	ENST00000505066		Q6ZQT7	251 aa		11.17	□□□□□ -0.62
DDR1-256	ENST00000505066	TAAR5	O14804	337 aa		11.16	□□□□□ -0.62
DDR1-256	ENST00000505066	PKD1	P98161	4303 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066		A0A087WTM6	91 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	IGHV3-16	A0A0C4DH30	117 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	IGHV3-38	A0A0C4DH36	116 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066		F6UZH7	168 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	GNRH2	O43555	120 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	DNAH10OS	P0CZ25	163 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	CDC34	P49427	236 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	ZNF876P	Q49A33	203 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	OR10J3	Q5JRS4	329 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066		Q6ZRN7	208 aa	Predicted RBP	11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	WFDC10B	Q8IUB3	73 aa		11.15	□□□□□ -0.62
DDR1-256	ENST00000505066	RHOH	Q15669	191 aa		11.14	□□□□□ -0.63
DDR1-256	ENST00000505066	C5orf17	Q8NAS9	161 aa		11.14	□□□□□ -0.63
DDR1-256	ENST00000505066	TMEM167B	Q9NRX6	74 aa		11.14	□□□□□ -0.63
DDR1-256	ENST00000505066	DYNC1H1	Q14204	4646 aa	Known RBP	11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	GCSH	P23434	173 aa		11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	S100A4	P26447	101 aa	Known RBP	11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	TIRAP	P58753	221 aa		11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	RAB2A	P61019	212 aa		11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	SAPCD1	Q5SSQ6	148 aa		11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	TNFRSF18	Q9Y5U5	241 aa		11.13	□□□□□ -0.63
DDR1-256	ENST00000505066	RYR1	P21817	5038 aa		11.12	□□□□□ -0.63
DDR1-256	ENST00000505066	HMGB3	O15347	200 aa	Known RBP	11.12	□□□□□ -0.63
DDR1-256	ENST00000505066	TYMS	P04818	313 aa		11.12	□□□□□ -0.63
DDR1-256	ENST00000505066	ARL14EPL	P0DKL9	152 aa		11.12	□□□□□ -0.63
DDR1-256	ENST00000505066	SMUG1	Q53HV7	270 aa		11.12	□□□□□ -0.63
DDR1-256	ENST00000505066	HSD17B11	Q8NBQ5	300 aa		11.12	□□□□□ -0.63
DDR1-256	ENST00000505066	IGLV5-52	A0A0A0MRZ9	124 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	TRAV8-1	A0A0A6YYK1	113 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	TRBV6-4	A0A1B0GX49	114 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	FAM229A	H3BQW9	127 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	CXorf1	O96002	111 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	GATA1	P15976	413 aa	Predicted RBP	11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	GNG5	P63218	68 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	SERF2	P84101	59 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	NTN5	Q8WTR8	489 aa	Predicted RBP	11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	TM2D2	Q9BX73	214 aa		11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	ACTR3C	Q9C0K3	210 aa	Predicted RBP	11.11	□□□□□ -0.63
DDR1-256	ENST00000505066	GCG	P01275	180 aa		11.1	□□□□□ -0.63
DDR1-256	ENST00000505066	TCRA	P04437	139 aa		11.1	□□□□□ -0.63
DDR1-256	ENST00000505066	INAFM2	P0DMQ5	153 aa		11.1	□□□□□ -0.63
DDR1-256	ENST00000505066	MGST1	P10620	155 aa	Known RBP	11.1	□□□□□ -0.63
DDR1-256	ENST00000505066	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	EIF3G	O75821	320 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	IFNA7	P01567	189 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	SUMO1	P63165	101 aa	Known RBP	11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	FLI1	Q01543	452 aa	Predicted RBP	11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	LINC01556	Q5JQF7	62 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	PRNT	Q86SH4	94 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	CYB561D1	Q8N8Q1	229 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	OR2G3	Q8NGZ4	309 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	RAB24	Q969Q5	203 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	SGK494	Q96LW2	274 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	PSMG3	Q9BT73	122 aa	Predicted RBP	11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	MED28	Q9H204	178 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066		Q9HAA7	133 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	PSG8	Q9UQ74	426 aa		11.09	□□□□□ -0.63
DDR1-256	ENST00000505066	STAG3L2	P0CL84	134 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	STAG3L3	P0CL85	134 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	GCHFR	P30047	84 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	IFITM3	Q01628	133 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	TOR2A	Q5JU69	321 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	SLC25A29	Q8N8R3	303 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	ATP6V0E2	Q8NHE4	81 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	WFDC1	Q9HC57	220 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	EPDR1	Q9UM22	224 aa		11.08	□□□□□ -0.64
DDR1-256	ENST00000505066	IGHV3-73	A0A0B4J1V6	119 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	LOC100131303	A0A0U1RQF7	123 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066		A8MWV9	139 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	RS1	O15537	224 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	SEC11B	P0C7V7	166 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	LGALSL	Q3ZCW2	172 aa	Predicted RBP	11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	LELP1	Q5T871	98 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	CFAP126	Q5VTH2	177 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	TMEM75	Q8N9X5	138 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	SYT8	Q8NBV8	401 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	GTSF1L	Q9H1H1	148 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	TNFSF18	Q9UNG2	199 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	URGCP-MRPS24	S4R325	110 aa		11.07	□□□□□ -0.64
DDR1-256	ENST00000505066	IBA57-AS1	B1ANH7	110 aa		11.06	□□□□□ -0.64
DDR1-256	ENST00000505066	FUS	P35637	526 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
DDR1-256	ENST00000505066	ASIP	P42127	132 aa		11.06	□□□□□ -0.64
DDR1-256	ENST00000505066	KCNIP4	Q6PIL6	250 aa		11.06	□□□□□ -0.64
DDR1-256	ENST00000505066	PTH2	Q96A98	100 aa		11.06	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms