RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-209ENST00000504157 MDFICQ9P1T7 246 aa13.76□□□□□ -0.21
POLR2J3-209ENST00000504157 ZNF672Q499Z4 452 aaPredicted RBP13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 C10orf126Q8N4M7 172 aa13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 YAE1D1Q9NRH1 226 aa13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 VPREB3Q9UKI3 123 aa13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 RPL7P18124 248 aaKnown RBP13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 ADIPOQQ15848 244 aa13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 OR10J6PQ8NGY7 276 aa13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 RASL10AQ92737 203 aa13.75□□□□□ -0.21
POLR2J3-209ENST00000504157 BUB1B-PAK6H3BSN5 160 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 CFC1BP0CG36 223 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 CFC1P0CG37 223 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 MEIG1Q5JSS6 88 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 Q8TAT8 98 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 FAM215AQ9Y5M1 114 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 SPTBN4Q9H254 2564 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 VKORC1Q9BQB6 163 aa13.74□□□□□ -0.21
POLR2J3-209ENST00000504157 SLC25A16P16260 332 aa13.73□□□□□ -0.21
POLR2J3-209ENST00000504157 Q6ZQT7 251 aa13.73□□□□□ -0.21
POLR2J3-209ENST00000504157 C22orf34Q6ZV56 151 aa13.73□□□□□ -0.21
POLR2J3-209ENST00000504157 ODF3Q96PU9 254 aa13.73□□□□□ -0.21
POLR2J3-209ENST00000504157 TMEM126AQ9H061 195 aa13.73□□□□□ -0.21
POLR2J3-209ENST00000504157 FOXC1Q12948 553 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 LINC01600Q96MT4 127 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 C9JAW5 83 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 HLA-DMBP28068 263 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 GFRALQ6UXV0 394 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 Q8N1Y9 231 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 TOMM6Q96B49 74 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 SCGB3A1Q96QR1 104 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 ONECUT1Q9UBC0 465 aa13.72□□□□□ -0.21
POLR2J3-209ENST00000504157 A0A0J9YY99 117 aa13.71□□□□□ -0.21
POLR2J3-209ENST00000504157 TGFAP01135 160 aa13.71□□□□□ -0.21
POLR2J3-209ENST00000504157 TRGV3P03979 118 aa13.71□□□□□ -0.21
POLR2J3-209ENST00000504157 CCL17Q92583 94 aa13.71□□□□□ -0.21
POLR2J3-209ENST00000504157 PRO1854Q9UHT4 67 aa13.71□□□□□ -0.21
POLR2J3-209ENST00000504157 URB1O60287 2271 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 MFAP4P55083 255 aa13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 IGHV3-30P01768 117 aa13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 IGHV3-30-5P0DP03 117 aa13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 RPL13AP40429 203 aaKnown RBP13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 CRIP2P52943 208 aaPredicted RBP13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 FAM27E3Q08E93 113 aa13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 C15orf53Q8NAA6 179 aa13.7□□□□□ -0.22
POLR2J3-209ENST00000504157 AKAP13Q12802 2813 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 TRAV26-2A0A0B4J265 109 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 LY6LH3BQJ8 138 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 ERCC8Q13216 396 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 ORMDL2Q53FV1 153 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 IGFBPL1Q8WX77 278 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 SMIM2Q9BVW6 85 aa13.69□□□□□ -0.22
POLR2J3-209ENST00000504157 MRPL23Q16540 153 aaKnown RBP13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 PPDPFQ9H3Y8 114 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 IGLV11-55A0A075B6I3 123 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 TRAV8-4A0A0B4J246 113 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 RBAKDNA6NC62 111 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 F8W735 103 aaPredicted RBP13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 ID1P41134 155 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 KLHL30-AS1Q8NEE0 82 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 BAALCQ8WXS3 180 aa13.68□□□□□ -0.22
POLR2J3-209ENST00000504157 DSPP15924 2871 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-209ENST00000504157 SMAD5-AS1Q9Y6J3 95 aa13.67□□□□□ -0.22
POLR2J3-209ENST00000504157 PLCE1Q9P212 2302 aa13.67□□□□□ -0.22
POLR2J3-209ENST00000504157 FANCD2OSQ96PS1 177 aa13.67□□□□□ -0.22
POLR2J3-209ENST00000504157 P0DMU3 169 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 FAM231AP0DMU4 169 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 FAM231CP0DMU5 169 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 TRPT1Q86TN4 253 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 NPBQ8NG41 125 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 FAM57AQ8TBR7 257 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 LINC01587Q99440 93 aa13.66□□□□□ -0.22
POLR2J3-209ENST00000504157 IGF2-ASQ6U949 168 aa13.65□□□□□ -0.22
POLR2J3-209ENST00000504157 CFHR4Q92496 578 aa13.65□□□□□ -0.22
POLR2J3-209ENST00000504157 KLK15Q9H2R5 256 aa13.65□□□□□ -0.22
POLR2J3-209ENST00000504157 IGKV3D-20A0A0C4DH25 116 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 NBR2O15453 112 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 SCGB2A1O75556 95 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 DYNAPQ8N1N2 210 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 NRGNQ92686 78 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 C21orf62Q9NYP8 219 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 ZFHX4Q86UP3 3567 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 CFAP47Q6ZTR5 3102 aa13.64□□□□□ -0.23
POLR2J3-209ENST00000504157 J3KRW8 73 aa13.63□□□□□ -0.23
POLR2J3-209ENST00000504157 IGHV3-33P01772 117 aa13.63□□□□□ -0.23
POLR2J3-209ENST00000504157 Q6ZS46 218 aa13.63□□□□□ -0.23
POLR2J3-209ENST00000504157 RNASE6Q93091 150 aaKnown RBP13.63□□□□□ -0.23
POLR2J3-209ENST00000504157 TIMD4Q96H15 378 aa13.63□□□□□ -0.23
POLR2J3-209ENST00000504157 TRAV2A0A0B4J234 112 aa13.63□□□□□ -0.23
POLR2J3-209ENST00000504157 IGHV7-4-1A0A0J9YVY3 117 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 TEX49A0A1B0GTD5 131 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 LGALS9O00182 355 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 TIMM23O14925 209 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 DLX1P56177 255 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 LY6DQ14210 128 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 HERVK_113P61574 105 aa13.62□□□□□ -0.23
POLR2J3-209ENST00000504157 BSPH1Q075Z2 132 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms