RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 AMN1Q8IY45 258 aa16.01■□□□□ 0.15
UBE2D3-216ENST00000503742 OR11H1Q8NG94 326 aa16.01■□□□□ 0.15
UBE2D3-216ENST00000503742 CHCHD1Q96BP2 118 aaKnown RBP16.01■□□□□ 0.15
UBE2D3-216ENST00000503742 MIEN1Q9BRT3 115 aa16.01■□□□□ 0.15
UBE2D3-216ENST00000503742 TMEM191AQ9H0A3 160 aa16.01■□□□□ 0.15
UBE2D3-216ENST00000503742 VAMP8Q9BV40 100 aa16■□□□□ 0.15
UBE2D3-216ENST00000503742 TMEM160Q9NX00 188 aa16■□□□□ 0.15
UBE2D3-216ENST00000503742 MSRB1Q9NZV6 116 aa16■□□□□ 0.15
UBE2D3-216ENST00000503742 M0QZ24 198 aa16■□□□□ 0.15
UBE2D3-216ENST00000503742 TFPI2P48307 235 aa16■□□□□ 0.15
UBE2D3-216ENST00000503742 WFDC12Q8WWY7 111 aa16■□□□□ 0.15
UBE2D3-216ENST00000503742 CUBNO60494 3623 aa15.99■□□□□ 0.15
UBE2D3-216ENST00000503742 J3KRW8 73 aa15.99■□□□□ 0.15
UBE2D3-216ENST00000503742 RNASE1P07998 156 aaKnown RBP15.99■□□□□ 0.15
UBE2D3-216ENST00000503742 ZNF688P0C7X2 276 aa15.99■□□□□ 0.15
UBE2D3-216ENST00000503742 MRPL51Q4U2R6 128 aaKnown RBP15.99■□□□□ 0.15
UBE2D3-216ENST00000503742 OR1N2Q8NGR9 330 aa15.99■□□□□ 0.15
UBE2D3-216ENST00000503742 SNAI2O43623 268 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 OR5AL1P0C617 328 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 LINC00614P0C842 121 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 SNRPD3P62318 126 aaKnown RBP15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 FASNP49327 2511 aaKnown RBP15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 KLLNB2CW77 178 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 SCGB2A2Q13296 93 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 KIR3DS1Q14943 382 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 PSMG4Q5JS54 123 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 KHDC1LQ5JSQ8 128 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 KLHL30-AS1Q8NEE0 82 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 DPF1Q92782 380 aa15.98■□□□□ 0.15
UBE2D3-216ENST00000503742 D6R8Y8 96 aa15.97■□□□□ 0.15
UBE2D3-216ENST00000503742 M0R2Z0 102 aa15.97■□□□□ 0.15
UBE2D3-216ENST00000503742 IGHV4-4A0A075B6R2 117 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 RNASE4P34096 147 aaKnown RBP15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 OR10AG1Q8NH19 301 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 RNF185Q96GF1 192 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 DUX3Q96PT4 197 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 ZNF705AQ6ZN79 300 aaPredicted RBP15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 ORMDL3Q8N138 153 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 Q8N976 141 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 OR9G4Q8NGQ1 327 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 ODF3Q96PU9 254 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 C16orf95Q9H693 158 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 PEMTQ9UBM1 199 aa15.96■□□□□ 0.15
UBE2D3-216ENST00000503742 A0A0J9YX75 114 aa15.95■□□□□ 0.14
UBE2D3-216ENST00000503742 KRTDAPP60985 99 aa15.95■□□□□ 0.14
UBE2D3-216ENST00000503742 C3orf79P0CE67 100 aa15.95■□□□□ 0.14
UBE2D3-216ENST00000503742 FOSL1P15407 271 aa15.95■□□□□ 0.14
UBE2D3-216ENST00000503742 DLX4Q92988 240 aaPredicted RBP15.95■□□□□ 0.14
UBE2D3-216ENST00000503742 PRELID3AQ96N28 172 aa15.95■□□□□ 0.14
UBE2D3-216ENST00000503742 ANXA2RQ3ZCQ2 193 aa15.94■□□□□ 0.14
UBE2D3-216ENST00000503742 HIST2H2BDQ6DRA6 164 aa15.94■□□□□ 0.14
UBE2D3-216ENST00000503742 IGHV1-24A0A0C4DH33 117 aa15.93■□□□□ 0.14
UBE2D3-216ENST00000503742 CSN3P07498 182 aa15.93■□□□□ 0.14
UBE2D3-216ENST00000503742 CACNG7P62955 275 aa15.93■□□□□ 0.14
UBE2D3-216ENST00000503742 H3BVH4 76 aa15.93■□□□□ 0.14
UBE2D3-216ENST00000503742 SMR3AQ99954 134 aa15.93■□□□□ 0.14
UBE2D3-216ENST00000503742 PAM16Q9Y3D7 125 aa15.93■□□□□ 0.14
UBE2D3-216ENST00000503742 HECTD1Q9ULT8 2610 aa15.92■□□□□ 0.14
UBE2D3-216ENST00000503742 HILS1P60008 231 aa15.92■□□□□ 0.14
UBE2D3-216ENST00000503742 LINC01006Q8NI28 216 aa15.92■□□□□ 0.14
UBE2D3-216ENST00000503742 NF1P21359 2839 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 MED14OSP0DP75 135 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 CKS2P33552 79 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 ZNF124Q15973 351 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 PMCHL1Q16048 86 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 EBLN2Q6P2I7 272 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 ZNF418Q8TF45 676 aaPredicted RBP15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 TRAV2A0A0B4J234 112 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 CD28P10747 220 aa15.91■□□□□ 0.14
UBE2D3-216ENST00000503742 SMKR1H3BMG3 65 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 PPBPP02775 128 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 LEPP41159 167 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 ASIPP42127 132 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 FHL3Q13643 280 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 FOXI2Q6ZQN5 318 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 RAX2Q96IS3 184 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 SCRT2Q9NQ03 307 aa15.9■□□□□ 0.14
UBE2D3-216ENST00000503742 EVI2AP22794 236 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 TDRG1Q3Y452 100 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 SPANXN1Q5VSR9 72 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 PRSS3P2Q8NHM4 247 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 AP5S1Q9NUS5 200 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 SIGLEC8Q9NYZ4 499 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 NPYP01303 97 aa15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 IFI27P40305 119 aaPredicted RBP15.89■□□□□ 0.13
UBE2D3-216ENST00000503742 GNRH2O43555 120 aa15.88■□□□□ 0.13
UBE2D3-216ENST00000503742 DUSP14O95147 198 aaKnown RBP15.88■□□□□ 0.13
UBE2D3-216ENST00000503742 NCR2O95944 276 aa15.88■□□□□ 0.13
UBE2D3-216ENST00000503742 C11orf44Q8N8P7 122 aa15.88■□□□□ 0.13
UBE2D3-216ENST00000503742 MTORP42345 2549 aa15.88■□□□□ 0.13
UBE2D3-216ENST00000503742 C7orf71A4D174 169 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 FA2HQ7L5A8 372 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 TMEM61Q8N0U2 210 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 LAMTOR2Q9Y2Q5 125 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 LY6G6DO95868 133 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 RNASE3P12724 160 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 S100A4P26447 101 aaKnown RBP15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 GAGE1Q13065 139 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 SMIM15Q7Z3B0 74 aa15.87■□□□□ 0.13
UBE2D3-216ENST00000503742 AGRNO00468 2067 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms