RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PPDPFQ9H3Y8 114 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 TRAV2A0A0B4J234 112 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 IGLV2-11P01706 119 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 LOXL1Q08397 574 aaPredicted RBP5.74□□□□□ -1.49
PDGFC-203ENST00000502773 SPATA12Q7Z6I5 190 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 V9GYY9 64 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 ANKHD1Q8IWZ3 2542 aaKnown RBP5.74□□□□□ -1.49
PDGFC-203ENST00000502773 FAM120AOSQ5T036 256 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 PEMTQ9UBM1 199 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 U3KQE9 123 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 TNCP24821 2201 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 HOXA3O43365 443 aaPredicted RBP5.74□□□□□ -1.49
PDGFC-203ENST00000502773 PRB3Q04118 309 aaPredicted RBP5.74□□□□□ -1.49
PDGFC-203ENST00000502773 ZNF56Q15929 161 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 GPHB5Q86YW7 130 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 TMEM126AQ9H061 195 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 TNFRSF18Q9Y5U5 241 aa5.74□□□□□ -1.49
PDGFC-203ENST00000502773 SMIM9A6NGZ8 99 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 CCDC179H3BU77 68 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 IGHV3-23P01764 117 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 EGR2P11161 476 aaPredicted RBP5.73□□□□□ -1.49
PDGFC-203ENST00000502773 NDPQ00604 133 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 ORMDL2Q53FV1 153 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 TMEM86BQ8N661 226 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 ZFAND3Q9H8U3 227 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 IGKV2-40A0A087WW87 121 aaPredicted RBP5.73□□□□□ -1.49
PDGFC-203ENST00000502773 IGHV4-61A0A0C4DH41 118 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 M0R3E3 92 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 IGKV2D-40P01614 121 aaPredicted RBP5.73□□□□□ -1.49
PDGFC-203ENST00000502773 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 Q6ZUT4 128 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 GTSF1Q8WW33 167 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 ODF3Q96PU9 254 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 TRAV25A0A0B4J276 109 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 IGHV7-4-1A0A0J9YVY3 117 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 CRXO43186 299 aaPredicted RBP5.73□□□□□ -1.49
PDGFC-203ENST00000502773 ARMS2P0C7Q2 107 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 DLX1P56177 255 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 SRSF1Q07955 248 aaKnown RBP eCLIP5.73□□□□□ -1.49
PDGFC-203ENST00000502773 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 DYNAPQ8N1N2 210 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 PHLDA3Q9Y5J5 127 aa5.73□□□□□ -1.49
PDGFC-203ENST00000502773 SMAD7O15105 426 aaKnown RBP5.72□□□□□ -1.49
PDGFC-203ENST00000502773 CNFNQ9BYD5 112 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 S4R3C0 116 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 REV3LO60673 3130 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 A0A0U1RQV1 116 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 NDUFS7O75251 213 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 COX8AP10176 69 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 PMVKQ15126 192 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 LY6EQ16553 131 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 LGALS9BQ3B8N2 356 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 LGALS9CQ6DKI2 356 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 U3KQK5 164 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 PKDREJQ9NTG1 2253 aa5.72□□□□□ -1.49
PDGFC-203ENST00000502773 TNRC18O15417 2968 aaPredicted RBP5.71□□□□□ -1.49
PDGFC-203ENST00000502773 C9JAW5 83 aa5.71□□□□□ -1.49
PDGFC-203ENST00000502773 G3V318 75 aa5.71□□□□□ -1.49
PDGFC-203ENST00000502773 ZNF688P0C7X2 276 aa5.71□□□□□ -1.49
PDGFC-203ENST00000502773 CDSNQ15517 529 aa5.71□□□□□ -1.49
PDGFC-203ENST00000502773 IGLC6P0CF74 106 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 NDUFV3P56181 108 aaKnown RBP5.71□□□□□ -1.5
PDGFC-203ENST00000502773 C15orf53Q8NAA6 179 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 PCNX1Q96RV3 2341 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 H7C1H1 209 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 FXYD7P58549 80 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 AMN1Q8IY45 258 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 Q8N8P6 123 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 MRAPQ8TCY5 172 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 CCDC140Q96MF4 163 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 C17orf77Q96MU5 243 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 VPREB3Q9UKI3 123 aa5.71□□□□□ -1.5
PDGFC-203ENST00000502773 D6R8Y8 96 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 M0R381 172 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 FOXI1Q12951 378 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 CHAC1Q9BUX1 264 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 RHPN1-AS1Q9BWJ2 59 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 TP53TG3Q9ULZ0 132 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 AKAP6Q13023 2319 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 LGALS9O00182 355 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 IGHG4P01861 327 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 COX6CP09669 75 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 TMEM219Q86XT9 240 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 AGPAT4-IT1Q9H0P7 198 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 ROS1P08922 2347 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 TRGV11A0A075B6L2 103 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV4-4A0A075B6R2 117 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV1-24A0A0C4DH33 117 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 F8W735 103 aaPredicted RBP5.7□□□□□ -1.5
PDGFC-203ENST00000502773 C19orf84I3L1E1 186 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 IL17RELQ6ZVW7 336 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 IGHV4-30-2A0A087WSY4 118 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 MRPL51Q4U2R6 128 aaKnown RBP5.7□□□□□ -1.5
PDGFC-203ENST00000502773 RUSC1-AS1Q66K80 236 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 BRD3OSQ6XYD6 125 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 GTSCR1Q86UQ5 136 aa5.7□□□□□ -1.5
PDGFC-203ENST00000502773 TMEM101Q96IK0 257 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms