RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 MGST1P10620 155 aaKnown RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BOP23527 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 NPPCP23582 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BBP33778 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 CSN1S1P47710 185 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BDP58876 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BCP62807 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 PSG9Q00887 426 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 LOXL1Q08397 574 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 PDE6HQ13956 83 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST2H2BEQ16778 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 ACTL10Q5JWF8 245 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 IBA57Q5T440 356 aaKnown RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 FAM162BQ5T6X4 162 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 SPATA31B1PQ5VZV4 182 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 Q5W150 140 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 FAM231DQ6ZW35 169 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 BAGE2Q86Y30 109 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BHQ93079 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 FAM167A-AS1Q96KT0 104 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 GPR82Q96P67 336 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BNQ99877 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 HIST1H2BMQ99879 126 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 GNB1LQ9BYB4 327 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 OTORQ9NRC9 128 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 SOX21Q9Y651 276 aaPredicted RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 TANC2Q9HCD6 1990 aa3.68□□□□□ -1.82
NEDD4-203ENST00000502612 INTS1Q8N201 2190 aaKnown RBP3.68□□□□□ -1.82
NEDD4-203ENST00000502612 RTTNQ86VV8 2226 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 TRBV6-1A0A0K0K1D8 114 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 PGPA6NDG6 321 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 GGTLC3B5MD39 225 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 NPFFO15130 113 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 GATCO43716 136 aaKnown RBP3.67□□□□□ -1.82
NEDD4-203ENST00000502612 LY6HO94772 140 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 HLA-DQA1P01909 254 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 RPL7P18124 248 aaKnown RBP3.67□□□□□ -1.82
NEDD4-203ENST00000502612 CNTFRP26992 372 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 RANP62826 216 aaKnown RBP3.67□□□□□ -1.82
NEDD4-203ENST00000502612 USF2Q15853 346 aaPredicted RBP3.67□□□□□ -1.82
NEDD4-203ENST00000502612 ORMDL2Q53FV1 153 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 Q56UQ5 140 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 ATP5L2Q7Z4Y8 100 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 MRPL55Q7Z7F7 128 aaKnown RBP3.67□□□□□ -1.82
NEDD4-203ENST00000502612 Q8N6K4 173 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 C11orf72Q8NBR9 251 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 OR4B1Q8NGF8 309 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 PIFOQ8TCI5 191 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 FRZBQ92765 325 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 FXYD5Q96DB9 178 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 SHANK2-AS3Q9BTD1 123 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 DERL1Q9BUN8 251 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 BPESC1Q9GZL8 116 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 C21orf62Q9NYP8 219 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 MRPL27Q9P0M9 148 aaKnown RBP3.67□□□□□ -1.82
NEDD4-203ENST00000502612 NAT8BQ9UHF3 227 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 ZFP30Q9Y2G7 519 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 KLF12Q9Y4X4 402 aa3.67□□□□□ -1.82
NEDD4-203ENST00000502612 MUC3AQ02505 3323 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 TRBV20OR9-2A0A075B6H5 130 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 TRBV7-1A0A0A6YYK4 115 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 TRAV5A0A0B4J249 113 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 A0A1B0GW15 77 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 IZUMO1RA6ND01 250 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 A8MWL6 223 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 K7EIM0 57 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 OXTP01178 125 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 IL4P05112 153 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 PYYP10082 97 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 SLC25A16P16260 332 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 PAFAH1B2P68402 229 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 KLRD1Q13241 179 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 KLK9Q2XQG4 91 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 Q6AWC8 147 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 PATE2Q6UY27 113 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 HIST3H2BBQ8N257 126 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 TMEM75Q8N9X5 138 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 BORCS7Q96B45 105 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 PACRGQ96M98 296 aaPredicted RBP3.66□□□□□ -1.82
NEDD4-203ENST00000502612 TIMM17AQ99595 171 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 NIT2Q9NQR4 276 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 ZNF492Q9P255 531 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 RABAC1Q9UI14 185 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 KLK9Q9UKQ9 250 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 V9GYV3 84 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 ZNF292O60281 2723 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 SPEGQ15772 3267 aa3.66□□□□□ -1.82
NEDD4-203ENST00000502612 IGLV1-50A0A075B6I6 118 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 TRBV19A0A075B6N1 114 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 IGKV2-28A0A075B6P5 120 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 IGHV1-69DA0A0B4J2H0 117 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 CENPVL3A0A0U1RRI6 287 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 A0A1W2PRD5 423 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 A0A1W2PRF3 423 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 A0A1W2PRM7 423 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 SMIM27A0A1W2PRY6 76 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 LRCOL1A6NCL2 159 aa3.65□□□□□ -1.83
NEDD4-203ENST00000502612 FAM223BA6NKX1 122 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms