RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 DNLZQ5SXM8 178 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 SPANXN1Q5VSR9 72 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 SYT8Q8NBV8 401 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 PHLDA3Q9Y5J5 127 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 SELENOKQ9Y6D0 94 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 F8P00451 2351 aa6.28□□□□□ -1.4
SF3A1-210ENST00000498259 TRAV12-3A0A0B4J271 114 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 IGKV3D-20A0A0C4DH25 116 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 KNCNA6PVL3 124 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 PPBPP02775 128 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 IGLC6P0CF74 106 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 GZMBP10144 247 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 SPINK13Q1W4C9 94 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 KRTAP24-1Q3LI83 254 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 GDF5OSQ5U4N7 250 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 ZNF493Q6ZR52 646 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 TMEM136Q6ZRR5 245 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 ZFP82Q8N141 532 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 TMEM208Q9BTX3 173 aa6.27□□□□□ -1.41
SF3A1-210ENST00000498259 SSBP4Q9BWG4 385 aaPredicted RBP6.27□□□□□ -1.41
SF3A1-210ENST00000498259 ANK3Q12955 4377 aaKnown RBP6.26□□□□□ -1.41
SF3A1-210ENST00000498259 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 IGHV1OR15-1A0A075B7D0 117 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 GRIFINA4D1Z8 144 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 SNAI2O43623 268 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BKO60814 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 ZNF324O75467 553 aaPredicted RBP6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BJP06899 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 CD7P09564 240 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 SMIM17P0DL12 118 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 NTF3P20783 257 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BOP23527 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 S100A2P29034 98 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BBP33778 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BDP58876 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BCP62807 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST2H2BEQ16778 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 ODF3L2Q3SX64 289 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 ANXA2RQ3ZCQ2 193 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 OR10J3Q5JRS4 329 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.26□□□□□ -1.41
SF3A1-210ENST00000498259 GFI1BQ5VTD9 330 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 AMTNQ6UX39 209 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 GATD1Q8NB37 220 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BHQ93079 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BNQ99877 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 HIST1H2BMQ99879 126 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 LINC00467Q9BRT7 94 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 TMEM191AQ9H0A3 160 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 GOLT1BQ9Y3E0 138 aa6.26□□□□□ -1.41
SF3A1-210ENST00000498259 CBY3A6NI87 242 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 M0R2Z0 102 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 WIPF1O43516 503 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 PPP1R17O96001 155 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 ARMS2P0C7Q2 107 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
SF3A1-210ENST00000498259 NDUFA6P56556 154 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 DEFB1P60022 68 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 Q0VG73 95 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 PRR31Q5SQ13 230 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 MUC21Q5SSG8 566 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 HIST2H2BDQ6DRA6 164 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 TRPT1Q86TN4 253 aaKnown RBP6.25□□□□□ -1.41
SF3A1-210ENST00000498259 BAGE3Q86Y29 109 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 LINC01587Q99440 93 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 NDUFAF3Q9BU61 184 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 LAMTOR2Q9Y2Q5 125 aa6.25□□□□□ -1.41
SF3A1-210ENST00000498259 TRAV12-2A0A075B6T6 113 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 LOC102724200A0A096LPH7 203 aaPredicted RBP6.24□□□□□ -1.41
SF3A1-210ENST00000498259 H3BVH4 76 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 ZNF415Q09FC8 603 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 COA6Q5JTJ3 125 aaKnown RBP6.24□□□□□ -1.41
SF3A1-210ENST00000498259 PIK3CD-AS1Q5SR53 167 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 PRR9Q5T870 116 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 ORMDL3Q8N138 153 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 AP1S3Q96PC3 154 aa6.24□□□□□ -1.41
SF3A1-210ENST00000498259 C2CD3Q4AC94 2353 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 C5orf52A6NGY3 159 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 PHOX2AO14813 284 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 SRIP30626 198 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 APOC4P55056 127 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 SNRPEP62304 92 aaKnown RBP6.23□□□□□ -1.41
SF3A1-210ENST00000498259 FAM104BQ5XKR9 115 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 SPXQ9BT56 116 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 SCRT2Q9NQ03 307 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 C11orf21Q9P2W6 132 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 TP53TG3Q9ULZ0 132 aa6.23□□□□□ -1.41
SF3A1-210ENST00000498259 TIMM8BQ9Y5J9 83 aaPredicted RBP6.23□□□□□ -1.41
SF3A1-210ENST00000498259 SETXQ7Z333 2677 aaKnown RBP6.22□□□□□ -1.41
SF3A1-210ENST00000498259 NIPBLQ6KC79 2804 aaeCLIP6.22□□□□□ -1.41
SF3A1-210ENST00000498259 KIR2DL5BA0A0G2JN68 375 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 KIR2DL5BA0A0G2JPC4 375 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 M0R381 172 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 UBE2CO00762 179 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 GNRH2O43555 120 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 HOXA5P20719 270 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 CKS2P33552 79 aa6.22□□□□□ -1.41
SF3A1-210ENST00000498259 SLAQ13239 276 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms