RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 LYZL2Q7Z4W2 148 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 LYPD6Q86Y78 171 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 GPHB5Q86YW7 130 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 MORN4Q8NDC4 146 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 PPDPFLQ8WWR9 84 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 COPS9Q8WXC6 57 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 RNASE6Q93091 150 aaKnown RBP1.98□□□□□ -2.09
CALD1-224ENST00000498254 DPH3P1Q9H4G8 78 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 LINC00588Q9Y4M8 146 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 LRRC9Q6ZRR7 1453 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 CFAP74Q9C0B2 1584 aa1.98□□□□□ -2.09
CALD1-224ENST00000498254 MYLKQ15746 1914 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 PLXNA4Q9HCM2 1894 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 MICAL3Q7RTP6 2002 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 IGHV3OR15-7A0A075B7D8 119 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 FXYD6-FXYD2A0A087WZ82 144 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 A0A0G2JND7 137 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 hADV29S1A0JD25 119 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 NUPR1O60356 82 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 HBDP02042 147 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 C1QAP02745 245 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 CD7P09564 240 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 HLA-DMBP28068 263 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 UBE2BP63146 152 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 INSL4Q14641 139 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 MPV17LQ2QL34 196 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 NMSQ5H8A3 153 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 SCXQ7RTU7 201 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 CLDND2Q8NHS1 167 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 CMTM2Q8TAZ6 248 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 C18orf32Q8TCD1 76 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 MS4A6EQ96DS6 147 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 MCEEQ96PE7 176 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 FXYD6Q9H0Q3 95 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 RGPD3A6NKT7 1758 aaPredicted RBP1.97□□□□□ -2.09
CALD1-224ENST00000498254 HELZP42694 1942 aaKnown RBP1.97□□□□□ -2.09
CALD1-224ENST00000498254 IQGAP2Q13576 1575 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 ATG2BQ96BY7 2078 aa1.97□□□□□ -2.09
CALD1-224ENST00000498254 XRN1Q8IZH2 1706 aaKnown RBP1.97□□□□□ -2.09
CALD1-224ENST00000498254 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.97□□□□□ -2.09
CALD1-224ENST00000498254 ABCC1P33527 1531 aa1.96□□□□□ -2.09
CALD1-224ENST00000498254 WIZO95785 1651 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 ZNF142P52746 1687 aaPredicted RBP1.96□□□□□ -2.1
CALD1-224ENST00000498254 COL1A1P02452 1464 aaPredicted RBP1.96□□□□□ -2.1
CALD1-224ENST00000498254 KIAA0556O60303 1618 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 MYO3AQ8NEV4 1616 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 LAMB1P07942 1786 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 TRBV7-7A0A0K0K1E9 115 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 SDCBPO00560 298 aaPredicted RBP1.96□□□□□ -2.1
CALD1-224ENST00000498254 TIMM17BO60830 172 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 ZNF737O75373 536 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 NDUFB2O95178 105 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 IGLV3-27P01718 113 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 IGKCP01834 107 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 SRP19P09132 144 aaKnown RBP1.96□□□□□ -2.1
CALD1-224ENST00000498254 RNASE2P10153 161 aaKnown RBP1.96□□□□□ -2.1
CALD1-224ENST00000498254 SSR2P43308 183 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 CDK5R1Q15078 307 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 PMCHL1Q16048 86 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 IGFBP7Q16270 282 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 LINC01545Q5VT33 79 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 PHF5AQ7RTV0 110 aaKnown RBP1.96□□□□□ -2.1
CALD1-224ENST00000498254 SPATA12Q7Z6I5 190 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 SBSPONQ8IVN8 264 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 OR8B3Q8NGG8 313 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 MUC7Q8TAX7 377 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 ADGRB1O14514 1584 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 ADGRB3O60242 1522 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 DLC1Q96QB1 1528 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 CFAP43Q8NDM7 1665 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 PATJQ8NI35 1801 aa1.96□□□□□ -2.1
CALD1-224ENST00000498254 KDM3BQ7LBC6 1761 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 ARFGEF2Q9Y6D5 1785 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 ABCA5Q8WWZ7 1642 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 TANC1Q9C0D5 1861 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 COL5A3P25940 1745 aaPredicted RBP1.95□□□□□ -2.1
CALD1-224ENST00000498254 SHANK3Q9BYB0 1731 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 UNC13BO14795 1591 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 VWDEQ8N2E2 1590 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 MDFIC2A0A1B0GVS7 189 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 A0A1W2PNN7 141 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 SSSCA1O60232 199 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 CPSF4O95639 269 aaKnown RBP1.95□□□□□ -2.1
CALD1-224ENST00000498254 IGKV1-16P04430 117 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 ZNF22P17026 224 aaPredicted RBP1.95□□□□□ -2.1
CALD1-224ENST00000498254 S100A4P26447 101 aaKnown RBP1.95□□□□□ -2.1
CALD1-224ENST00000498254 RNASE4P34096 147 aaKnown RBP1.95□□□□□ -2.1
CALD1-224ENST00000498254 FUSP35637 526 aaKnown RBP eCLIP1.95□□□□□ -2.1
CALD1-224ENST00000498254 KRTDAPP60985 99 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 PCBD1P61457 104 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 RPL30P62888 115 aaKnown RBP1.95□□□□□ -2.1
CALD1-224ENST00000498254 ZNF345Q14585 488 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 SOSTDC1Q6X4U4 206 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 C7orf65Q6ZTY9 151 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 DEFB107AQ8IZN7 70 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 Q8N2B8 174 aa1.95□□□□□ -2.1
CALD1-224ENST00000498254 RPRMLQ8N4K4 120 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms