RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 Q8NAQ8 132 aa9.8□□□□□ -0.84
CPNE1-227ENST00000498056 OCC1Q8TAD7 63 aa9.8□□□□□ -0.84
CPNE1-227ENST00000498056 TMEM263Q8WUH6 116 aaKnown RBP9.8□□□□□ -0.84
CPNE1-227ENST00000498056 DAZAP1Q96EP5 407 aaKnown RBP9.8□□□□□ -0.84
CPNE1-227ENST00000498056 NEU1Q99519 415 aa9.8□□□□□ -0.84
CPNE1-227ENST00000498056 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
CPNE1-227ENST00000498056 TP53TG3Q9ULZ0 132 aa9.8□□□□□ -0.84
CPNE1-227ENST00000498056 LY96Q9Y6Y9 160 aa9.8□□□□□ -0.84
CPNE1-227ENST00000498056 TRGV11A0A075B6L2 103 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 SMIM9A6NGZ8 99 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 F8W036 122 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 P01737 135 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 TYMSP04818 313 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 AZU1P20160 251 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
CPNE1-227ENST00000498056 ZNF415Q09FC8 603 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 COL7A1Q02388 2944 aa9.79□□□□□ -0.84
CPNE1-227ENST00000498056 A0A0J9YWU9 116 aa9.78□□□□□ -0.84
CPNE1-227ENST00000498056 TMEM218A2RU14 115 aa9.78□□□□□ -0.84
CPNE1-227ENST00000498056 RPL23P62829 140 aaKnown RBP9.78□□□□□ -0.84
CPNE1-227ENST00000498056 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
CPNE1-227ENST00000498056 IBA57Q5T440 356 aaKnown RBP9.78□□□□□ -0.84
CPNE1-227ENST00000498056 RNASE8Q8TDE3 154 aaKnown RBP9.78□□□□□ -0.84
CPNE1-227ENST00000498056 LINC00467Q9BRT7 94 aa9.78□□□□□ -0.84
CPNE1-227ENST00000498056 RNASE7Q9H1E1 156 aaKnown RBP9.78□□□□□ -0.84
CPNE1-227ENST00000498056 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 TMEM189A5PLL7 270 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 C19orf71A6NCJ1 209 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 SNURFLB1AK76 121 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 TDRG1Q3Y452 100 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 OR2D3Q8NGH3 330 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 C11orf68Q9H3H3 251 aaKnown RBP9.77□□□□□ -0.85
CPNE1-227ENST00000498056 TIMM8BQ9Y5J9 83 aaPredicted RBP9.77□□□□□ -0.85
CPNE1-227ENST00000498056 U3KQK5 164 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 MUC4Q99102 2169 aa9.77□□□□□ -0.85
CPNE1-227ENST00000498056 GRIFINA4D1Z8 144 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 H3BVH4 76 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 GNRH2O43555 120 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
CPNE1-227ENST00000498056 ASIPP42127 132 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 ERVFC1-1P60608 527 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 ZNF493Q6ZR52 646 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 SLC7A5P1Q8MH63 180 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 ISOC2Q96AB3 205 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 RPP21Q9H633 154 aaKnown RBP9.76□□□□□ -0.85
CPNE1-227ENST00000498056 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
CPNE1-227ENST00000498056 IGHV3-16A0A0C4DH30 117 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 PNRC1Q12796 327 aaPredicted RBP9.75□□□□□ -0.85
CPNE1-227ENST00000498056 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 C11orf72Q8NBR9 251 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 NUDT10Q8NFP7 164 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 NUDT11Q96G61 164 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 SEC11CQ9BY50 192 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
CPNE1-227ENST00000498056 PLAC8L1A1L4L8 177 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 GATCO43716 136 aaKnown RBP9.74□□□□□ -0.85
CPNE1-227ENST00000498056 GZMBP10144 247 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 TCL1AP56279 114 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 FAM231DQ6ZW35 169 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 C15orf54Q8N8G6 183 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 SFRP2Q96HF1 295 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 TPPP3Q9BW30 176 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
CPNE1-227ENST00000498056 CELA1Q9UNI1 258 aa9.74□□□□□ -0.85
CPNE1-227ENST00000498056 XKRY2A2RUG3 117 aa9.73□□□□□ -0.85
CPNE1-227ENST00000498056 RPS20P60866 119 aaKnown RBP9.73□□□□□ -0.85
CPNE1-227ENST00000498056 IL17DQ8TAD2 202 aa9.73□□□□□ -0.85
CPNE1-227ENST00000498056 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
CPNE1-227ENST00000498056 OR10G8Q8NGN5 311 aa9.72□□□□□ -0.85
CPNE1-227ENST00000498056 OSTCQ9NRP0 149 aa9.72□□□□□ -0.85
CPNE1-227ENST00000498056 TRGV1A0A0A0MS02 117 aa9.71□□□□□ -0.86
CPNE1-227ENST00000498056 TEX48A0A1B0GUV7 120 aa9.71□□□□□ -0.86
CPNE1-227ENST00000498056 CXCL1P09341 107 aa9.71□□□□□ -0.86
CPNE1-227ENST00000498056 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
CPNE1-227ENST00000498056 C9orf85Q96MD7 179 aa9.71□□□□□ -0.86
CPNE1-227ENST00000498056 IL36BQ9NZH7 164 aa9.71□□□□□ -0.86
CPNE1-227ENST00000498056 DKK2Q9UBU2 259 aa9.71□□□□□ -0.86
CPNE1-227ENST00000498056 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
CPNE1-227ENST00000498056 STAB2Q8WWQ8 2551 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 GAGE12BA1L429 117 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 CXorf65A6NEN9 183 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 LYRM9A8MSI8 78 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 GAGE7O76087 117 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 APOC3P02656 99 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 ARMS2P0C7Q2 107 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 GAGE12FP0CL80 117 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 GAGE12GP0CL81 117 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 GAGE12IP0CL82 117 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 SPART-AS1P0CW21 52 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 CT83Q5H943 113 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 Q6ZTI0 123 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 FER1L6-AS1Q8NA97 138 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 V9GYV3 84 aa9.7□□□□□ -0.86
CPNE1-227ENST00000498056 A8MWL6 223 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 M0R2P5 195 aa9.69□□□□□ -0.86
CPNE1-227ENST00000498056 M0R381 172 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 154.5 ms