RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-208ENST00000496204 DMXL1Q9Y485 3027 aa0.7□□□□□ -2.3
RAD50-208ENST00000496204 BCORL1Q5H9F3 1711 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 ACANP16112 2415 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 DMBT1Q9UGM3 2413 aaPredicted RBP0.69□□□□□ -2.3
RAD50-208ENST00000496204 A2MP01023 1474 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 ERCC6Q03468 1493 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 SHANK2Q9UPX8 1470 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 FREM2Q5SZK8 3169 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 CEP290O15078 2479 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 ZZEF1O43149 2961 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 LYRM1O43325 122 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 FABP2P12104 132 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 S100GP29377 79 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 SPRNQ5BIV9 151 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 FAM74A1Q5RGS3 127 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 GDF5OSQ5U4N7 250 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 LRRC18Q8N456 261 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 SKA2Q8WVK7 121 aaPredicted RBP0.69□□□□□ -2.3
RAD50-208ENST00000496204 PSMF1Q92530 271 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 TCEAL2Q9H3H9 227 aaPredicted RBP0.69□□□□□ -2.3
RAD50-208ENST00000496204 GINS2Q9Y248 185 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 ZFP30Q9Y2G7 519 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 AKAP11Q9UKA4 1901 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 CEP250Q9BV73 2442 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 FRYLO94915 3013 aa0.69□□□□□ -2.3
RAD50-208ENST00000496204 PARP14Q460N5 1801 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 WDR87Q6ZQQ6 2873 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 DLEC1Q9Y238 1755 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 LOC107984640A0A0U1RRK4 108 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 C9orf170A2RU37 121 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 C5orf67F2Z3F1 127 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 CCL25O15444 150 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 NUPR1O60356 82 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 FABP4P15090 132 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 COX7CP15954 63 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 SDC2P34741 201 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 OR4B1Q8NGF8 309 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 OR5H6Q8NGV6 325 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 ODF3Q96PU9 254 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 MRPL57Q9BQC6 102 aaKnown RBP0.68□□□□□ -2.3
RAD50-208ENST00000496204 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 HSPB11Q9Y547 144 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 CASZ1Q86V15 1759 aa0.68□□□□□ -2.3
RAD50-208ENST00000496204 OVOS2A0A0G2JMS6 1433 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 SPEF2Q9C093 1822 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 DMXL2Q8TDJ6 3036 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 TRBV27A0A0K0K1C4 114 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 A0A1B0GX51 115 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 J3KT08 172 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 MT-ND6P03923 174 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 ZNF25P17030 456 aaPredicted RBP0.67□□□□□ -2.3
RAD50-208ENST00000496204 NDUFA6P56556 154 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 RPS28P62857 69 aaKnown RBP0.67□□□□□ -2.3
RAD50-208ENST00000496204 MRPS36P82909 103 aaKnown RBP0.67□□□□□ -2.3
RAD50-208ENST00000496204 PSG9Q00887 426 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 VMA21Q3ZAQ7 101 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 LINC00322Q6ZN03 302 aaPredicted RBP0.67□□□□□ -2.3
RAD50-208ENST00000496204 LINC00305Q7Z4B0 112 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 LINC00269Q8N2A0 174 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 FAM19A2Q8N3H0 131 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 MORN4Q8NDC4 146 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 OR10AG1Q8NH19 301 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 ZNF431Q8TF32 576 aaPredicted RBP0.67□□□□□ -2.3
RAD50-208ENST00000496204 PYDC1Q8WXC3 89 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 BORCS5Q969J3 196 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 PRELID3AQ96N28 172 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 OR4C12Q96R67 309 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 LXNQ9BS40 222 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 C19orf12Q9NSK7 152 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 CBLN4Q9NTU7 201 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 TRAPPC2LQ9UL33 140 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 TPRKBQ9Y3C4 175 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 C22orf24Q9Y442 160 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 ZNF142P52746 1687 aaPredicted RBP0.67□□□□□ -2.3
RAD50-208ENST00000496204 PTPRMP28827 1452 aa0.67□□□□□ -2.3
RAD50-208ENST00000496204 SPTA1P02549 2419 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 CLASP1Q7Z460 1538 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 TRAV36DV7A0A075B6V5 113 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 TRAV13-1A0A0B4J241 112 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 F8W1H4 67 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 SRP9P49458 86 aaKnown RBP0.66□□□□□ -2.3
RAD50-208ENST00000496204 MAXP61244 160 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 CIRBPQ14011 172 aaKnown RBP0.66□□□□□ -2.3
RAD50-208ENST00000496204 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
RAD50-208ENST00000496204 FOXI2Q6ZQN5 318 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 TEN1Q86WV5 123 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 GKN2Q86XP6 184 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 TEX29Q8N6K0 151 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 TMEM229BQ8NBD8 167 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 NAT14Q8WUY8 206 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 ANP32BQ92688 251 aaKnown RBP0.66□□□□□ -2.3
RAD50-208ENST00000496204 CST11Q9H112 138 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 NIT2Q9NQR4 276 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 CC2D2AQ9P2K1 1620 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 MED23Q9ULK4 1368 aa0.66□□□□□ -2.3
RAD50-208ENST00000496204 KDM5AP29375 1690 aaKnown RBP0.65□□□□□ -2.3
RAD50-208ENST00000496204 ESPL1Q14674 2120 aa0.65□□□□□ -2.3
RAD50-208ENST00000496204 MED12Q93074 2177 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms