RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 A0A1B0GW15 77 aa12.17□□□□□ -0.46
HLA-A-208ENST00000496081 OR4C46A6NHA9 309 aa12.17□□□□□ -0.46
HLA-A-208ENST00000496081 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
HLA-A-208ENST00000496081 MAP6D1Q9H9H5 199 aa12.17□□□□□ -0.46
HLA-A-208ENST00000496081 JMJD1CQ15652 2540 aa12.16□□□□□ -0.46
HLA-A-208ENST00000496081 KNCNA6PVL3 124 aa12.16□□□□□ -0.46
HLA-A-208ENST00000496081 GATD1Q8NB37 220 aa12.16□□□□□ -0.46
HLA-A-208ENST00000496081 IFITM10A6NMD0 228 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 SAP30O75446 220 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 LEPP41159 167 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 SSTP61278 116 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 ZNF124Q15973 351 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 HIST3H2BBQ8N257 126 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 NAGKQ9UJ70 344 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 F2Z2F3 143 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 S100A8P05109 93 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 SRIP30626 198 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 AKR1D1P51857 326 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 AMTNQ6UX39 209 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 PRIMA1Q86XR5 153 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 CNFNQ9BYD5 112 aa12.15□□□□□ -0.46
HLA-A-208ENST00000496081 HLA-DRB4P13762 266 aa12.14□□□□□ -0.47
HLA-A-208ENST00000496081 ANXA2RQ3ZCQ2 193 aa12.14□□□□□ -0.47
HLA-A-208ENST00000496081 TP53TG3Q9ULZ0 132 aa12.14□□□□□ -0.47
HLA-A-208ENST00000496081 HLA-DRB4X5D2U9 266 aa12.14□□□□□ -0.47
HLA-A-208ENST00000496081 C7orf71A4D174 169 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 H3BMM0 161 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 M0R2Z0 102 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 NTF3P20783 257 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 CDKN1BP46527 198 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 Q0VG73 95 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 ZNF493Q6ZR52 646 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 TRAV12-2A0A075B6T6 113 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 TRAV12-3A0A0B4J271 114 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 A8MTW9 85 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 ZNF324O75467 553 aaPredicted RBP12.13□□□□□ -0.47
HLA-A-208ENST00000496081 IGLV1-51P01701 117 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 PF4P02776 101 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 TSPOP30536 169 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 TWIST1Q15672 202 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 ODF3L2Q3SX64 289 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 LINC00518Q8N0U6 118 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 TMEM256Q8N2U0 113 aa12.13□□□□□ -0.47
HLA-A-208ENST00000496081 ALKBH7Q9BT30 221 aaPredicted RBP12.13□□□□□ -0.47
HLA-A-208ENST00000496081 TENM1Q9UKZ4 2725 aa12.12□□□□□ -0.47
HLA-A-208ENST00000496081 LINC00482Q8N8I6 264 aa12.12□□□□□ -0.47
HLA-A-208ENST00000496081 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
HLA-A-208ENST00000496081 LOC102724200A0A096LPH7 203 aaPredicted RBP12.11□□□□□ -0.47
HLA-A-208ENST00000496081 SNAI2O43623 268 aa12.11□□□□□ -0.47
HLA-A-208ENST00000496081 OR5AL1P0C617 328 aa12.11□□□□□ -0.47
HLA-A-208ENST00000496081 OR10J3Q5JRS4 329 aa12.11□□□□□ -0.47
HLA-A-208ENST00000496081 OR10AG1Q8NH19 301 aa12.11□□□□□ -0.47
HLA-A-208ENST00000496081 CITED1Q99966 193 aa12.11□□□□□ -0.47
HLA-A-208ENST00000496081 RBMY1BA6NDE4 496 aaKnown RBP12.1□□□□□ -0.47
HLA-A-208ENST00000496081 RBMY1EA6NEQ0 496 aaKnown RBP12.1□□□□□ -0.47
HLA-A-208ENST00000496081 GNRH2O43555 120 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 NUPR1O60356 82 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 RBMY1DP0C7P1 496 aaKnown RBP12.1□□□□□ -0.47
HLA-A-208ENST00000496081 LINC00310P59036 64 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 H3BVH4 76 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 S100A2P29034 98 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 ASIPP42127 132 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 C18orf32Q8TCD1 76 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
HLA-A-208ENST00000496081 FXYD7P58549 80 aa12.09□□□□□ -0.47
HLA-A-208ENST00000496081 DNLZQ5SXM8 178 aa12.09□□□□□ -0.47
HLA-A-208ENST00000496081 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
HLA-A-208ENST00000496081 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
HLA-A-208ENST00000496081 ATRQ13535 2644 aa12.09□□□□□ -0.47
HLA-A-208ENST00000496081 SERF1AO75920 110 aa12.08□□□□□ -0.48
HLA-A-208ENST00000496081 FABP4P15090 132 aa12.08□□□□□ -0.48
HLA-A-208ENST00000496081 FAM104BQ5XKR9 115 aa12.08□□□□□ -0.48
HLA-A-208ENST00000496081 KCNS1Q96KK3 526 aa12.08□□□□□ -0.48
HLA-A-208ENST00000496081 IGHV4-4A0A075B6R2 117 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 CRXO43186 299 aaPredicted RBP12.07□□□□□ -0.48
HLA-A-208ENST00000496081 AMBPP02760 352 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 S100A4P26447 101 aaKnown RBP12.07□□□□□ -0.48
HLA-A-208ENST00000496081 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 TDRG1Q3Y452 100 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 AMN1Q8IY45 258 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 RCHY1Q96PM5 261 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 TIMM8BQ9Y5J9 83 aaPredicted RBP12.07□□□□□ -0.48
HLA-A-208ENST00000496081 OR11H12B2RN74 326 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 MED14OSP0DP75 135 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 ESDP10768 282 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 RNASE3P12724 160 aaKnown RBP12.07□□□□□ -0.48
HLA-A-208ENST00000496081 CACNG7P62955 275 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 SPANXN1Q5VSR9 72 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
HLA-A-208ENST00000496081 BEAN1Q3B7T3 259 aa12.06□□□□□ -0.48
HLA-A-208ENST00000496081 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
HLA-A-208ENST00000496081 SPRY2O43597 315 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 CD7P09564 240 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 RBMY1A1P0DJD3 496 aaKnown RBP12.05□□□□□ -0.48
HLA-A-208ENST00000496081 RBMY1CP0DJD4 496 aa12.05□□□□□ -0.48
HLA-A-208ENST00000496081 RBMY1FQ15415 496 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms