RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 Q6ZN92 141 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 Q6ZRN7 208 aaPredicted RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 MRPL52Q86TS9 123 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 BAP18Q8IXM2 172 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 NKAPP1Q8N9T2 125 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 OR51G1Q8NGK1 321 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 RBPMSQ93062 196 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 TMEM230Q96A57 120 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 ACY3Q96HD9 319 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 NARS2Q96I59 477 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 PFDN5Q99471 154 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 RTBDNQ9BSG5 229 aaPredicted RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 MIXL1Q9H2W2 232 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 Q9H3A6 140 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 NAA60Q9H7X0 242 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 NIT2Q9NQR4 276 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 MTFP1Q9UDX5 166 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 RCL1Q9Y2P8 373 aaKnown RBP2.88□□□□□ -1.95
VPS52-222ENST00000495981 GOLT1BQ9Y3E0 138 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 ALG5Q9Y673 324 aa2.88□□□□□ -1.95
VPS52-222ENST00000495981 LPAP08519 4548 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 TRAV8-2A0A0B4J237 113 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 ISLRO14498 428 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 DLEU1O43261 78 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 EIF3GO75821 320 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS52-222ENST00000495981 HTN3P15516 51 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 TSPOP30536 169 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 SUB1P53999 127 aaKnown RBP eCLIP2.87□□□□□ -1.95
VPS52-222ENST00000495981 TMBIM6P55061 237 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 ZNF90Q03938 601 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 PSG3Q16557 428 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 CLLU1Q5K131 121 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 C1orf194Q5T5A4 169 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 FAM78BQ5VT40 261 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 SELENOHQ8IZQ5 122 aaKnown RBP2.87□□□□□ -1.95
VPS52-222ENST00000495981 TCTE3Q8IZS6 198 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 LINC00612Q8N6U2 182 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 CCDC71LQ8N9Z2 235 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 C15orf53Q8NAA6 179 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 OR11H7Q8NGC8 314 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 COQ8AQ8NI60 647 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 STOML3Q8TAV4 291 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 IGF2BP2-AS1Q96M15 143 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 HIST1H4GQ99525 98 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 GGACTQ9BVM4 153 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 ENY2Q9NPA8 101 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 DOK5Q9P104 306 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 COMMD3Q9UBI1 195 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 LINC00588Q9Y4M8 146 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 TMEM56-RWDD3S4R434 201 aa2.87□□□□□ -1.95
VPS52-222ENST00000495981 LYRM9A8MSI8 78 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 M0R2Z0 102 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 PITX3O75364 302 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 SCO1O75880 301 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 ATG12O94817 140 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 INSP01308 110 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 IFNA21P01568 189 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 HBE1P02100 147 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 PRM2P04554 102 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 RD3LP0DJH9 198 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 ASIPP42127 132 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 TAS2R19P59542 299 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 LYZP61626 148 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 DAD1P61803 113 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 PSG9Q00887 426 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 BTN1A1Q13410 526 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 SURF2Q15527 256 aaPredicted RBP2.86□□□□□ -1.95
VPS52-222ENST00000495981 ZNF726P1Q15940 193 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 GUK1Q16774 197 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 SPINK13Q1W4C9 94 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 RRN3P1Q2M238 152 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 SCGB2B2Q4G0G5 96 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 SPATA31B1PQ5VZV4 182 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 C12orf45Q8N5I9 185 aaPredicted RBP2.86□□□□□ -1.95
VPS52-222ENST00000495981 TMEM229BQ8NBD8 167 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 INO80EQ8NBZ0 244 aaPredicted RBP2.86□□□□□ -1.95
VPS52-222ENST00000495981 OR51S1Q8NGJ8 323 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 OR4C16Q8NGL9 310 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 TERB2Q8NHR7 220 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 Q8WTZ3 238 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 SMIM4Q8WVI0 70 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 AP3S1Q92572 193 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 RASL10AQ92737 203 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 IL22RA2Q969J5 263 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 PACRGQ96M98 296 aaPredicted RBP2.86□□□□□ -1.95
VPS52-222ENST00000495981 LINC00052Q96N35 136 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 UPK3BQ9BT76 320 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 PBDC1Q9BVG4 233 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 NAA50Q9GZZ1 169 aaKnown RBP2.86□□□□□ -1.95
VPS52-222ENST00000495981 MCUBQ9NWR8 336 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 COPZ2Q9P299 210 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 Q9UF83 564 aa2.86□□□□□ -1.95
VPS52-222ENST00000495981 A0A087WXM4 84 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 ZFP92A6NM28 416 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 CEBPZOSA8MTT3 80 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 ZNF705GA8MUZ8 300 aaPredicted RBP2.85□□□□□ -1.95
VPS52-222ENST00000495981 KRTAP4-16G5E9R7 235 aaPredicted RBP2.85□□□□□ -1.95
VPS52-222ENST00000495981 H3BRN7 92 aa2.85□□□□□ -1.95
VPS52-222ENST00000495981 GABARAPH6UMI1 98 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms