RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 OR11H12B2RN74 326 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 E9PLD3 99 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 G3V4G9 280 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 S100A4P26447 101 aaKnown RBP7.46□□□□□ -1.22
SURF1-204ENST00000495952 OR11H1Q8NG94 326 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 OR11H2Q8NH07 326 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 RASL10AQ92737 203 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 TMEM160Q9NX00 188 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 CHTOPQ9Y3Y2 248 aaKnown RBP7.46□□□□□ -1.22
SURF1-204ENST00000495952 PHLDA3Q9Y5J5 127 aa7.46□□□□□ -1.22
SURF1-204ENST00000495952 ANKHD1Q8IWZ3 2542 aaKnown RBP7.45□□□□□ -1.22
SURF1-204ENST00000495952 SPENQ96T58 3664 aaKnown RBP7.45□□□□□ -1.22
SURF1-204ENST00000495952 RNF223E7ERA6 249 aa7.45□□□□□ -1.22
SURF1-204ENST00000495952 IGLV1-40P01703 118 aa7.45□□□□□ -1.22
SURF1-204ENST00000495952 IGHV4-39P01824 125 aa7.45□□□□□ -1.22
SURF1-204ENST00000495952 SCGB3A1Q96QR1 104 aa7.45□□□□□ -1.22
SURF1-204ENST00000495952 DAZ1Q9NQZ3 744 aaKnown RBP7.45□□□□□ -1.22
SURF1-204ENST00000495952 ZNF292O60281 2723 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 ABCA1O95477 2261 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 IGHV3OR16-13A0A075B7E8 117 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 IGHV3-49A0A0A0MS15 119 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 IGHV3-74A0A0B4J1X5 117 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 TRAV26-2A0A0B4J265 109 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 MYMXA0A1B0GTQ4 84 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 TMEM238LA0A1B0GVL6 79 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 A6NJY4 79 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 ID1P41134 155 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 CFHR3Q02985 330 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 C21orf62-AS1Q17RA5 79 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 ANXA2RQ3ZCQ2 193 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 C2orf66Q6UXQ4 117 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 UNQ9165/PRO28630Q6UXU0 137 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 TMEM219Q86XT9 240 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 C10orf105Q8TEF2 133 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 RAB37Q96AX2 223 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 CSTL1Q9H114 145 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 PTPRQQ9UMZ3 2332 aa7.44□□□□□ -1.22
SURF1-204ENST00000495952 TRBV6-5A0A0K0K1A5 114 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 IGLL5B9A064 214 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 F8W1H4 67 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 RNASE3P12724 160 aaKnown RBP7.43□□□□□ -1.22
SURF1-204ENST00000495952 GATA3P23771 443 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 RIPPLY3P57055 190 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 BAALCQ8WXS3 180 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 TMEM141Q96I45 108 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 TIMM17AQ99595 171 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
SURF1-204ENST00000495952 CYSLTR1Q9Y271 337 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 LOC400499M0QZD8 3231 aa7.43□□□□□ -1.22
SURF1-204ENST00000495952 ANKRD11Q6UB99 2663 aaPredicted RBP7.42□□□□□ -1.22
SURF1-204ENST00000495952 HERVK_113P61574 105 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 MAPKAPK5-AS1Q8N8E1 139 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 RNF152Q8N8N0 203 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 HIST1H4GQ99525 98 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 PRORYQ9H606 182 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 AKAP13Q12802 2813 aa7.42□□□□□ -1.22
SURF1-204ENST00000495952 H3BUX3 64 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 J3QR89 54 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 LGALS9O00182 355 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 SAP30O75446 220 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 TRBV12-3P01733 135 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 MGPP08493 103 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 TCTAP57738 103 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 RHOHQ15669 191 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 RRN3P1Q2M238 152 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 LYRM7Q5U5X0 104 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 CLEC2AQ6UVW9 174 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 FOXI2Q6ZQN5 318 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 C14orf178Q8N769 122 aaPredicted RBP7.41□□□□□ -1.22
SURF1-204ENST00000495952 RHPN1-AS1Q9BWJ2 59 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 TTTY13Q9BZ97 58 aa7.41□□□□□ -1.22
SURF1-204ENST00000495952 SPANXB1Q9NS25 103 aaPredicted RBP7.41□□□□□ -1.22
SURF1-204ENST00000495952 IGHV4-61A0A0C4DH41 118 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 VCYO14598 125 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 MSMBP08118 114 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 LGALS1P09382 135 aaKnown RBP7.4□□□□□ -1.22
SURF1-204ENST00000495952 PF4V1P10720 104 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 SCGB1A1P11684 91 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 COX6B1P14854 86 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
SURF1-204ENST00000495952 DSCR9P59020 149 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 LINC00315P59091 139 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 FAM159AQ6UWV7 190 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 SYT8Q8NBV8 401 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 RPL39LQ96EH5 51 aaKnown RBP7.4□□□□□ -1.22
SURF1-204ENST00000495952 C9orf85Q96MD7 179 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 CCL19Q99731 98 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 EDA2RQ9HAV5 297 aa7.4□□□□□ -1.22
SURF1-204ENST00000495952 PRRC2CQ9Y520 2896 aaKnown RBP7.4□□□□□ -1.23
SURF1-204ENST00000495952 NBEAQ8NFP9 2946 aa7.39□□□□□ -1.23
SURF1-204ENST00000495952 RP1L1Q8IWN7 2480 aaPredicted RBP7.39□□□□□ -1.23
SURF1-204ENST00000495952 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
SURF1-204ENST00000495952 PRSS29PA6NIE9 313 aa7.39□□□□□ -1.23
SURF1-204ENST00000495952 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
SURF1-204ENST00000495952 RNASE4P34096 147 aaKnown RBP7.39□□□□□ -1.23
SURF1-204ENST00000495952 PMVKQ15126 192 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms