RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TOMM6Q96B49 74 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 EBI3Q14213 229 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 NFE4Q86UQ8 179 aa11.73□□□□□ -0.53
SDF4-207ENST00000494748 ASH1LQ9NR48 2969 aaKnown RBP11.72□□□□□ -0.53
SDF4-207ENST00000494748 IGHV3-66A0A0C4DH42 116 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 PRSS29PA6NIE9 313 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 COX6B1P14854 86 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 A0A1B0GV72 72 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 LY6HO94772 140 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 CYSLTR1Q9Y271 337 aa11.72□□□□□ -0.53
SDF4-207ENST00000494748 UBE2D1P51668 147 aa11.71□□□□□ -0.53
SDF4-207ENST00000494748 RASL10AQ92737 203 aa11.71□□□□□ -0.53
SDF4-207ENST00000494748 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.53
SDF4-207ENST00000494748 RAB9AP51151 201 aa11.71□□□□□ -0.54
SDF4-207ENST00000494748 FOXI1Q12951 378 aa11.71□□□□□ -0.54
SDF4-207ENST00000494748 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.54
SDF4-207ENST00000494748 MRAP2Q96G30 205 aa11.71□□□□□ -0.54
SDF4-207ENST00000494748 CCDC140Q96MF4 163 aa11.71□□□□□ -0.54
SDF4-207ENST00000494748 C1QTNF4Q9BXJ3 329 aa11.71□□□□□ -0.54
SDF4-207ENST00000494748 PRTN3P24158 256 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 PLEKHB2Q96CS7 222 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 SVIPQ8NHG7 77 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 OR11H12B2RN74 326 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 M0R1W7 72 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 C15orf32Q32M92 178 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 Q8N9W7 124 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 OR11H1Q8NG94 326 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 OR11H2Q8NH07 326 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 ATP6V0E2Q8NHE4 81 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 BAALCQ8WXS3 180 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
SDF4-207ENST00000494748 CENPVL3A0A0U1RRI6 287 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 HOXA3O43365 443 aaPredicted RBP11.69□□□□□ -0.54
SDF4-207ENST00000494748 CD3EP07766 207 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 H3BVH4 76 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 SLC25A16P16260 332 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 TMEM78Q5T7P6 136 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 LINC01548A6NM66 108 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 APOMO95445 188 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 IGF1P05019 195 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 CLEC3BP05452 202 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 C8orf86Q6ZUL3 223 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
SDF4-207ENST00000494748 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
SDF4-207ENST00000494748 IGHV3OR16-13A0A075B7E8 117 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 IGHV3-74A0A0B4J1X5 117 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 TSPAN13O95857 204 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 CKS1BP61024 79 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 UBE2D3P61077 147 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 UBE2D2P62837 147 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 VMO1Q7Z5L0 202 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 RPL39LQ96EH5 51 aaKnown RBP11.68□□□□□ -0.54
SDF4-207ENST00000494748 PRADC1Q9BSG0 188 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 KLK15Q9H2R5 256 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 SPRY2O43597 315 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 CD7P09564 240 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 SPANXN1Q5VSR9 72 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 FAM110DQ8TAY7 271 aaPredicted RBP11.68□□□□□ -0.54
SDF4-207ENST00000494748 SCGB3A1Q96QR1 104 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 PRR30Q53SZ7 412 aaPredicted RBP11.68□□□□□ -0.54
SDF4-207ENST00000494748 U3KQE9 123 aa11.68□□□□□ -0.54
SDF4-207ENST00000494748 ZNF292O60281 2723 aa11.67□□□□□ -0.54
SDF4-207ENST00000494748 CRYGDP07320 174 aa11.67□□□□□ -0.54
SDF4-207ENST00000494748 ZFP2Q6ZN57 461 aa11.67□□□□□ -0.54
SDF4-207ENST00000494748 SUMO2P61956 95 aaKnown RBP11.67□□□□□ -0.54
SDF4-207ENST00000494748 AJUBAQ96IF1 538 aa11.67□□□□□ -0.54
SDF4-207ENST00000494748 CARD19Q96LW7 228 aa11.67□□□□□ -0.54
SDF4-207ENST00000494748 ORMDL2Q53FV1 153 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 RAXQ9Y2V3 346 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 LINC01549A6NIU2 74 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 SYT8Q8NBV8 401 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 C20orf173Q96LM9 149 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 HIF1ANQ9NWT6 349 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 DLX4Q92988 240 aaPredicted RBP11.66□□□□□ -0.54
SDF4-207ENST00000494748 MUC4Q99102 2169 aa11.66□□□□□ -0.54
SDF4-207ENST00000494748 ITLN2Q8WWU7 325 aaPredicted RBP11.65□□□□□ -0.54
SDF4-207ENST00000494748 MRPL16Q9NX20 251 aaKnown RBP11.65□□□□□ -0.54
SDF4-207ENST00000494748 TSHBP01222 138 aa11.65□□□□□ -0.54
SDF4-207ENST00000494748 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
SDF4-207ENST00000494748 C2orf66Q6UXQ4 117 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 GLMPQ8WWB7 406 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 ZNF815PA8K554 130 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 CLEC19AQ6UXS0 136 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 ZFAND2AQ8N6M9 145 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 PTH2Q96A98 100 aa11.64□□□□□ -0.55
SDF4-207ENST00000494748 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 XGP55808 180 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 GPHB5Q86YW7 130 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 SBSPONQ8IVN8 264 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 KLHL30-AS1Q8NEE0 82 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 OOSP1A8MZH6 123 aa11.63□□□□□ -0.55
SDF4-207ENST00000494748 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms