RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-222ENST00000494672 SS18Q15532 418 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 ZNF56Q15929 161 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 FAM219BQ5XKK7 198 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 NKAPP1Q8N9T2 125 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 ZNF563Q8TA94 476 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 CHCHD1Q96BP2 118 aaKnown RBP3.32□□□□□ -1.88
CCDC66-222ENST00000494672 CYYR1Q96J86 154 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 ZNF492Q9P255 531 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 GNG13Q9P2W3 67 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 CELA1Q9UNI1 258 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 V9GY05 133 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 NRXN3Q9Y4C0 1643 aa3.32□□□□□ -1.88
CCDC66-222ENST00000494672 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.32□□□□□ -1.88
CCDC66-222ENST00000494672 FER1L5A0AVI2 2057 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 A0A0G2JMZ2 1700 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 LRRC37A2A6NM11 1700 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 LRRC37AA6NMS7 1700 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 LMO7Q8WWI1 1683 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 DEPDC5O75140 1603 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 C12orf77C9JDV5 145 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 NPYP01303 97 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 INAFM2P0DMQ5 153 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 ZNF136P52737 540 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 FXYD2P54710 66 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 SMIM11AP58511 58 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 LINC00313P59037 77 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 INSL4Q14641 139 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 FBXL19-AS1Q494R0 122 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 C6orf99Q4VX62 202 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 FAM104BQ5XKR9 115 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 C7orf65Q6ZTY9 151 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 Q8N8P6 123 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 ABHD14BQ96IU4 210 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 Q9H3A6 140 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 NHP2Q9NX24 153 aaKnown RBP3.31□□□□□ -1.88
CCDC66-222ENST00000494672 IL36BQ9NZH7 164 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 LY96Q9Y6Y9 160 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 KIAA2026Q5HYC2 2103 aa3.31□□□□□ -1.88
CCDC66-222ENST00000494672 PAPPA2Q9BXP8 1791 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 DOT1LQ8TEK3 1739 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 NHSL1Q5SYE7 1610 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 BAZ2BQ9UIF8 2168 aaKnown RBP3.3□□□□□ -1.88
CCDC66-222ENST00000494672 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 IGHV3OR15-7A0A075B7D8 119 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-222ENST00000494672 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 TCRBV4S1A1TA0A5B7 111 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 K7EQD1 137 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 NDUFC1O43677 76 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 LEPROTL1O95214 131 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 IGKV1-5P01602 117 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 S100A4P26447 101 aaKnown RBP3.3□□□□□ -1.88
CCDC66-222ENST00000494672 UBE2D3P61077 147 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 UBE2D2P62837 147 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 RPL18Q07020 188 aaKnown RBP3.3□□□□□ -1.88
CCDC66-222ENST00000494672 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 DEFB121Q5J5C9 76 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 CLLU1OSQ5K130 101 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 GUSBP11Q6P575 273 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 CEMP1Q6PRD7 247 aaPredicted RBP3.3□□□□□ -1.88
CCDC66-222ENST00000494672 PRNTQ86SH4 94 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 FAM19A2Q8N3H0 131 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 TYMSOSQ8TAI1 123 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 SPTSSAQ969W0 71 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 DOCK11Q5JSL3 2073 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 PLXNB3Q9ULL4 1909 aa3.3□□□□□ -1.88
CCDC66-222ENST00000494672 DUOX1Q9NRD9 1551 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 IGHV6-1A0A0B4J1U7 121 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 MYMXA0A1B0GTQ4 84 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 CRYM-AS1A6NIL9 109 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 CEBPZOSA8MTT3 80 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 IBA57-AS1B1ANH7 110 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 H3BMM0 161 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 RTL8CO15255 209 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 SLC25A20O43772 301 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 COX7A2P2O60397 106 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 IGLV3-27P01718 113 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 CCKP06307 115 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 RNASE2P10153 161 aaKnown RBP3.29□□□□□ -1.88
CCDC66-222ENST00000494672 SLC25A16P16260 332 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 CKS2P33552 79 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 UBE2AP49459 152 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 NCBP2P52298 156 aaKnown RBP eCLIP3.29□□□□□ -1.88
CCDC66-222ENST00000494672 MFAP2P55001 183 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 PDPNQ86YL7 162 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 CD177Q8N6Q3 437 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 SLC25A29Q8N8R3 303 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 UBE2WQ96B02 151 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 SLC25A2Q9BXI2 301 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 DYNLRB1Q9NP97 96 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 XCL2Q9UBD3 114 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 LRRC37A3O60309 1634 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 COL16A1Q07092 1604 aaPredicted RBP3.29□□□□□ -1.88
CCDC66-222ENST00000494672 SHROOM3Q8TF72 1996 aa3.29□□□□□ -1.88
CCDC66-222ENST00000494672 TDRD6O60522 2096 aaKnown RBP3.28□□□□□ -1.88
CCDC66-222ENST00000494672 IGHV1-69DA0A0B4J2H0 117 aa3.28□□□□□ -1.88
CCDC66-222ENST00000494672 BUB1B-PAK6H3BSN5 160 aa3.28□□□□□ -1.88
CCDC66-222ENST00000494672 BCE1O60756 84 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms