RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 A0A0G2JLM5 398 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 SOCS3O14543 225 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 FCER1GP30273 86 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 ERASQ7Z444 233 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 CACNA1AO00555 2505 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 CSMD2Q7Z408 3487 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 IGLV1-40P01703 118 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 EDN2P20800 178 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 RNASE4P34096 147 aaKnown RBP8.5□□□□□ -1.05
CHMP3-209ENST00000494623 ZFAND2AQ8N6M9 145 aa8.5□□□□□ -1.05
CHMP3-209ENST00000494623 RNASE8Q8TDE3 154 aaKnown RBP8.5□□□□□ -1.05
CHMP3-209ENST00000494623 BRI3O95415 125 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 PRSS1P07477 247 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 S100A4P26447 101 aaKnown RBP8.49□□□□□ -1.05
CHMP3-209ENST00000494623 PTTG1IPP53801 180 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 KIR3DS1Q14943 382 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 C12orf54Q6X4T0 127 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 MAPK1IP1LQ8NDC0 245 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 TMEM158Q8WZ71 300 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 M0R381 172 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 IGHV4-59P01825 116 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 Q8N8P6 123 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 MYO18BQ8IUG5 2567 aa8.49□□□□□ -1.05
CHMP3-209ENST00000494623 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 DEFB112Q30KQ8 113 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 LINC01546A6NGU7 62 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 CCL25O15444 150 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 ANXA2RQ3ZCQ2 193 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 NRACQ8N912 160 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 PEF1Q9UBV8 284 aaKnown RBP8.48□□□□□ -1.05
CHMP3-209ENST00000494623 ACACBO00763 2458 aa8.48□□□□□ -1.05
CHMP3-209ENST00000494623 IGLV2-18A0A075B6J9 118 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 IGHV4-4A0A075B6R2 117 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 CBY3A6NI87 242 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 GNRH2O43555 120 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 PRB1P04280 392 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 NMUP48645 174 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 C10orf99Q6UWK7 81 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 OR1N2Q8NGR9 330 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 WFDC12Q8WWY7 111 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 DAZ1Q9NQZ3 744 aaKnown RBP8.47□□□□□ -1.05
CHMP3-209ENST00000494623 SMPXQ9UHP9 88 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 FGF6P10767 208 aa8.47□□□□□ -1.05
CHMP3-209ENST00000494623 TAX1BP3O14907 124 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 TGFAP01135 160 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 DSCR9P59020 149 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 CFHR3Q02985 330 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 VAMP3Q15836 100 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 DPF1Q92782 380 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 PHLDA3Q9Y5J5 127 aa8.46□□□□□ -1.05
CHMP3-209ENST00000494623 CD5LO43866 347 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 SMIM17P0DL12 118 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 ASIPP42127 132 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 CDKN1BP46527 198 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 UBE2V1Q13404 147 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 LAGE3Q14657 143 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 DEFB125Q8N687 156 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 C14orf178Q8N769 122 aaPredicted RBP8.46□□□□□ -1.06
CHMP3-209ENST00000494623 LINC01356Q8N9X3 169 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 FOXC2Q99958 501 aa8.46□□□□□ -1.06
CHMP3-209ENST00000494623 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 BOD1L2Q8IYS8 172 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 TMEM8BA6NDV4 472 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 GATA3P23771 443 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 ODF1Q14990 250 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 USP9YO00507 2555 aaPredicted RBP8.45□□□□□ -1.06
CHMP3-209ENST00000494623 SRSF1Q07955 248 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHMP3-209ENST00000494623 MYOZ3Q8TDC0 251 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 FAM19A4Q96LR4 140 aa8.45□□□□□ -1.06
CHMP3-209ENST00000494623 POLQO75417 2590 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 A1L4Q6 167 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 C7orf71A4D174 169 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 SLC25A16P16260 332 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 PSMB8P28062 276 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 MGPP08493 103 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 MRAP2Q96G30 205 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 CENPEQ02224 2701 aa8.44□□□□□ -1.06
CHMP3-209ENST00000494623 TMEM238C9JI98 176 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 K7EMT4 169 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 ID1P41134 155 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 TMEM160Q9NX00 188 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 HHLA3Q9XRX5 114 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 FAM208BQ5VWN6 2430 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 ZFYVE26Q68DK2 2539 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 ATP5LO75964 103 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 IGKCP01834 107 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 Q5PR19 223 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 GTSCR1Q86UQ5 136 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
CHMP3-209ENST00000494623 DPH3P1Q9H4G8 78 aa8.43□□□□□ -1.06
CHMP3-209ENST00000494623 IGKV2D-26A0A0A0MRZ7 120 aa8.42□□□□□ -1.06
CHMP3-209ENST00000494623 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
CHMP3-209ENST00000494623 DCANP1Q8TF63 244 aa8.42□□□□□ -1.06
CHMP3-209ENST00000494623 RASL10AQ92737 203 aa8.42□□□□□ -1.06
CHMP3-209ENST00000494623 ZMAT4Q9H898 229 aa8.42□□□□□ -1.06
CHMP3-209ENST00000494623 DOPEY2Q9Y3R5 2298 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms