RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 ZNF324O75467 553 aaPredicted RBP12.35□□□□□ -0.43
ATG4B-225ENST00000494465 CSN3P07498 182 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 CD33P20138 364 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 FHL3Q13643 280 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 AMN1Q8IY45 258 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 AGRNO00468 2067 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 A0A0J9YX75 114 aa12.34□□□□□ -0.43
ATG4B-225ENST00000494465 RNASE4P34096 147 aaKnown RBP12.34□□□□□ -0.43
ATG4B-225ENST00000494465 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
ATG4B-225ENST00000494465 SETD2Q9BYW2 2564 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-225ENST00000494465 AMTP48728 403 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 NIT1Q86X76 327 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 FAM19A2Q8N3H0 131 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 CITED2Q99967 270 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-225ENST00000494465 U3KQK5 164 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 SNAI2O43623 268 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 OR5AL1P0C617 328 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 PMCHP20382 165 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 OR10AG1Q8NH19 301 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 TMEM191AQ9H0A3 160 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.44
ATG4B-225ENST00000494465 A0A1W2PRX2 142 aa12.32□□□□□ -0.44
ATG4B-225ENST00000494465 DMRTA1Q5VZB9 504 aa12.32□□□□□ -0.44
ATG4B-225ENST00000494465 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
ATG4B-225ENST00000494465 MRPL51Q4U2R6 128 aaKnown RBP12.32□□□□□ -0.44
ATG4B-225ENST00000494465 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
ATG4B-225ENST00000494465 TMEM61Q8N0U2 210 aa12.32□□□□□ -0.44
ATG4B-225ENST00000494465 ODF3Q96PU9 254 aa12.32□□□□□ -0.44
ATG4B-225ENST00000494465 NDUFA7O95182 113 aa12.31□□□□□ -0.44
ATG4B-225ENST00000494465 ANXA2RQ3ZCQ2 193 aa12.31□□□□□ -0.44
ATG4B-225ENST00000494465 RNF185Q96GF1 192 aa12.31□□□□□ -0.44
ATG4B-225ENST00000494465 SETXQ7Z333 2677 aaKnown RBP12.31□□□□□ -0.44
ATG4B-225ENST00000494465 IGHV4-4A0A075B6R2 117 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 D6R8Y8 96 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 CCL24O00175 119 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 TSSC4Q9Y5U2 329 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-225ENST00000494465 H3BVH4 76 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 HSBP1O75506 76 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 DEFB114Q30KQ6 69 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
ATG4B-225ENST00000494465 TRAV2A0A0B4J234 112 aa12.29□□□□□ -0.44
ATG4B-225ENST00000494465 EBLN2Q6P2I7 272 aa12.29□□□□□ -0.44
ATG4B-225ENST00000494465 RAB4AP20338 218 aa12.29□□□□□ -0.44
ATG4B-225ENST00000494465 PROK1P58294 105 aa12.29□□□□□ -0.44
ATG4B-225ENST00000494465 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
ATG4B-225ENST00000494465 CHCHD1Q96BP2 118 aaKnown RBP12.29□□□□□ -0.44
ATG4B-225ENST00000494465 NSD1Q96L73 2696 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-225ENST00000494465 IGKV3-20P01619 116 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 LINC00614P0C842 121 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 HIVEP1P15822 2718 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 INAFM1C9JVW0 142 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 S100A12P80511 92 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 LURAP1LQ8IV03 231 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 ORMDL3Q8N138 153 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 JMJD8Q96S16 334 aa12.28□□□□□ -0.44
ATG4B-225ENST00000494465 GNRH2O43555 120 aa12.27□□□□□ -0.44
ATG4B-225ENST00000494465 LEPP41159 167 aa12.27□□□□□ -0.44
ATG4B-225ENST00000494465 DYNLRB2Q8TF09 96 aa12.27□□□□□ -0.44
ATG4B-225ENST00000494465 PRELID3AQ96N28 172 aa12.27□□□□□ -0.44
ATG4B-225ENST00000494465 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.44
ATG4B-225ENST00000494465 ADARB2-AS1A8MUL3 147 aa12.27□□□□□ -0.45
ATG4B-225ENST00000494465 SMKR1H3BMG3 65 aa12.27□□□□□ -0.45
ATG4B-225ENST00000494465 SCGB1D1O95968 90 aa12.27□□□□□ -0.45
ATG4B-225ENST00000494465 RNASE3P12724 160 aaKnown RBP12.27□□□□□ -0.45
ATG4B-225ENST00000494465 EVI2AP22794 236 aa12.27□□□□□ -0.45
ATG4B-225ENST00000494465 CACNG7P62955 275 aa12.27□□□□□ -0.45
ATG4B-225ENST00000494465 CD300EQ496F6 205 aaPredicted RBP12.27□□□□□ -0.45
ATG4B-225ENST00000494465 LINC00469Q8N7U9 141 aa12.27□□□□□ -0.45
ATG4B-225ENST00000494465 TRAV12-3A0A0B4J271 114 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 C7orf71A4D174 169 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 M0R2Z0 102 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 DUSP14O95147 198 aaKnown RBP12.26□□□□□ -0.45
ATG4B-225ENST00000494465 ASIPP42127 132 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 DEFB131AP59861 70 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 PMCHL1Q16048 86 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 Q8N976 141 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 MUC4Q99102 2169 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 SPRY2O43597 315 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 GAS8-AS1O95177 125 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 MED14OSP0DP75 135 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 SPANXN1Q5VSR9 72 aa12.26□□□□□ -0.45
ATG4B-225ENST00000494465 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 IGHV1-24A0A0C4DH33 117 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 A8MTW9 85 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 NCR2O95944 276 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 CKS2P33552 79 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 ZNF256Q9Y2P7 627 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-225ENST00000494465 FN1P02751 2386 aaKnown RBP12.25□□□□□ -0.45
ATG4B-225ENST00000494465 KNCNA6PVL3 124 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 CDKN1BP46527 198 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
ATG4B-225ENST00000494465 TIMM8BQ9Y5J9 83 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-225ENST00000494465 NPYP01303 97 aa12.24□□□□□ -0.45
ATG4B-225ENST00000494465 C3orf79P0CE67 100 aa12.24□□□□□ -0.45
ATG4B-225ENST00000494465 S100A4P26447 101 aaKnown RBP12.24□□□□□ -0.45
ATG4B-225ENST00000494465 KRTDAPP60985 99 aa12.24□□□□□ -0.45
ATG4B-225ENST00000494465 ZNF124Q15973 351 aa12.24□□□□□ -0.45
ATG4B-225ENST00000494465 SIGLEC8Q9NYZ4 499 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms