RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RAB9AP51151 201 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 LYZP61626 148 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 PRB3Q04118 309 aaPredicted RBP8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 TAL2Q16559 108 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 DUX4L9Q6RFH8 374 aaPredicted RBP8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 LINC00173Q6ZV60 143 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 ZC2HC1AQ96GY0 325 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 ZNF414Q96IQ9 312 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 PRELID3AQ96N28 172 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 CNFNQ9BYD5 112 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 KRTAP9-2Q9BYQ4 174 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 NXT2Q9NPJ8 142 aaKnown RBP8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 SIGLEC8Q9NYZ4 499 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 RPH3ALQ9UNE2 315 aa8.17□□□□□ -1.1
PDLIM1-205ENST00000493949 A0A087X0K7 114 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 ATP5LO75964 103 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 HERC2O95714 4834 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 CCL3L1P16619 93 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 RYR1P21817 5038 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 KRTAP10-11P60412 298 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 EGFEM1PQ0D2K5 195 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 RNF151Q2KHN1 245 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 NEGR1Q7Z3B1 354 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 FER1L6-AS1Q8NA97 138 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 OR2K2Q8NGT1 345 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 IFI27L1Q96BM0 104 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 ZNRD1Q9P1U0 126 aa8.16□□□□□ -1.1
PDLIM1-205ENST00000493949 TMEM189A5PLL7 270 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 CBY3A6NI87 242 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 ZNF785A8K8V0 405 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 ADARB2-AS1A8MUL3 147 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 LINC01619G3V211 115 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 MRPS12O15235 138 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 FCN3O75636 299 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 RPL7P18124 248 aaKnown RBP8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 DLX1P56177 255 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 ADAMTSL5Q6ZMM2 481 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 NDUFA11Q86Y39 141 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 MUC7Q8TAX7 377 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 RNF125Q96EQ8 232 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 MAP1LC3AQ9H492 121 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 CTSZQ9UBR2 303 aa8.15□□□□□ -1.1
PDLIM1-205ENST00000493949 IGHV1-3A0A0C4DH29 117 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 A0A0G2JLM5 398 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 A0A1W2PPM0 123 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 J3QR89 54 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 FABP2P12104 132 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 FCGR2BP31994 310 aaPredicted RBP8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 NSUN5P1Q3KNT7 163 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 Q6ZVH6 145 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 ZMAT4Q9H898 229 aa8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 CHTOPQ9Y3Y2 248 aaKnown RBP8.14□□□□□ -1.11
PDLIM1-205ENST00000493949 A0A096LNJ9 63 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 KRTAP9-6A0A140TA67 174 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 RBAKDNA6NC62 111 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 PRSS47A8MTI9 375 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 BUB1B-PAK6H3BSN5 160 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 IGLC6P0CF74 106 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 EVI2AP22794 236 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 HCP5Q6MZN7 132 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 C1orf122Q6ZSJ8 110 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 ZNF491Q8N8L2 437 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 ARPC1AQ92747 370 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 RITA1Q96K30 269 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 THYN1Q9P016 225 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 STARD9Q9P2P6 4700 aa8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 HUWE1Q7Z6Z7 4374 aaKnown RBP8.13□□□□□ -1.11
PDLIM1-205ENST00000493949 A0A1W2PRD5 423 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 A0A1W2PRF3 423 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 A0A1W2PRM7 423 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 OOSP1A8MZH6 123 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 D6R8Y8 96 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 K7EIM0 57 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 K7EMI3 77 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 NDUFA3O95167 84 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 SMIM13P0DJ93 91 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 FCER1GP30273 86 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 IFI27P40305 119 aaPredicted RBP8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 MFAP4P55083 255 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 NPBQ8NG41 125 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 RPEQ96AT9 228 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 MEGF9Q9H1U4 602 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 TPSG1Q9NRR2 321 aa8.12□□□□□ -1.11
PDLIM1-205ENST00000493949 TRAV8-1A0A0A6YYK1 113 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 LINC01549A6NIU2 74 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 CIDEAO60543 219 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 CSN3P07498 182 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 CKS2P33552 79 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 CACNG7P62955 275 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 TWIST1Q15672 202 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 KLK9Q2XQG4 91 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
PDLIM1-205ENST00000493949 EXOC3-AS1Q8N2X6 119 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms