RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 NMES1Q9C002 83 aa11.66□□□□□ -0.54
COL9A1-210ENST00000493682 MYCBP2O75592 4640 aa11.66□□□□□ -0.54
COL9A1-210ENST00000493682 PSCAO43653 123 aa11.65□□□□□ -0.54
COL9A1-210ENST00000493682 KHDC3LQ587J8 217 aa11.65□□□□□ -0.54
COL9A1-210ENST00000493682 FFAR4Q5NUL3 377 aa11.65□□□□□ -0.54
COL9A1-210ENST00000493682 MZT2BQ6NZ67 158 aa11.65□□□□□ -0.54
COL9A1-210ENST00000493682 NHLRC2Q8NBF2 726 aa11.65□□□□□ -0.54
COL9A1-210ENST00000493682 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-210ENST00000493682 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
COL9A1-210ENST00000493682 GATA1P15976 413 aaPredicted RBP11.64□□□□□ -0.55
COL9A1-210ENST00000493682 PPT1P50897 306 aa11.64□□□□□ -0.55
COL9A1-210ENST00000493682 LINC01556Q5JQF7 62 aa11.64□□□□□ -0.55
COL9A1-210ENST00000493682 ATP5SQ99766 215 aa11.64□□□□□ -0.55
COL9A1-210ENST00000493682 OTORQ9NRC9 128 aa11.64□□□□□ -0.55
COL9A1-210ENST00000493682 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
COL9A1-210ENST00000493682 TRAV21A0A0B4J279 112 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 PGPA6NDG6 321 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 EIF3GO75821 320 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL9A1-210ENST00000493682 TYMSP04818 313 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 TAS2R45P59539 299 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 ASAH1Q13510 395 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 Q6ZSN1 163 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 CMTM2Q8TAZ6 248 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
COL9A1-210ENST00000493682 GOLT1AQ6ZVE7 132 aa11.62□□□□□ -0.55
COL9A1-210ENST00000493682 Q8N814 137 aa11.62□□□□□ -0.55
COL9A1-210ENST00000493682 TVP23CQ96ET8 276 aa11.62□□□□□ -0.55
COL9A1-210ENST00000493682 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
COL9A1-210ENST00000493682 F6UZH7 168 aa11.61□□□□□ -0.55
COL9A1-210ENST00000493682 CYCSP99999 105 aaKnown RBP11.61□□□□□ -0.55
COL9A1-210ENST00000493682 Q9HAA7 133 aa11.61□□□□□ -0.55
COL9A1-210ENST00000493682 SDF2L1Q9HCN8 221 aa11.61□□□□□ -0.55
COL9A1-210ENST00000493682 TREM1Q9NP99 234 aa11.61□□□□□ -0.55
COL9A1-210ENST00000493682 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
COL9A1-210ENST00000493682 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
COL9A1-210ENST00000493682 FBLL1A6NHQ2 334 aaKnown RBP11.6□□□□□ -0.55
COL9A1-210ENST00000493682 PFN1P07737 140 aaKnown RBP11.6□□□□□ -0.55
COL9A1-210ENST00000493682 FAM74A1Q5RGS3 127 aa11.6□□□□□ -0.55
COL9A1-210ENST00000493682 SLC25A29Q8N8R3 303 aa11.6□□□□□ -0.55
COL9A1-210ENST00000493682 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
COL9A1-210ENST00000493682 HSPB11Q9Y547 144 aa11.6□□□□□ -0.55
COL9A1-210ENST00000493682 H2BFSP57053 126 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 OR10J3Q5JRS4 329 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 ARL6IP6Q8N6S5 226 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 ENKURQ8TC29 256 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 PPP1R1CQ8WVI7 109 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 ASB13Q8WXK3 278 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 KCNS1Q96KK3 526 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 SMIM3Q9BZL3 60 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 FAM30AQ9NZY2 134 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 NDUFA13Q9P0J0 144 aa11.59□□□□□ -0.55
COL9A1-210ENST00000493682 IGHV3-30P01768 117 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 IGHV3-33P01772 117 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 IGHV3-30-5P0DP03 117 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 GNG5P63218 68 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 ZNF876PQ49A33 203 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 CFAP126Q5VTH2 177 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
COL9A1-210ENST00000493682 RS1O15537 224 aa11.57□□□□□ -0.56
COL9A1-210ENST00000493682 LELP1Q5T871 98 aa11.57□□□□□ -0.56
COL9A1-210ENST00000493682 DPPA3Q6W0C5 159 aa11.57□□□□□ -0.56
COL9A1-210ENST00000493682 PQLC2Q6ZP29 291 aa11.57□□□□□ -0.56
COL9A1-210ENST00000493682 IGHV3-73A0A0B4J1V6 119 aa11.56□□□□□ -0.56
COL9A1-210ENST00000493682 TRBV6-4A0A1B0GX49 114 aa11.56□□□□□ -0.56
COL9A1-210ENST00000493682 MPC2O95563 127 aa11.56□□□□□ -0.56
COL9A1-210ENST00000493682 RPL12P30050 165 aaKnown RBP11.56□□□□□ -0.56
COL9A1-210ENST00000493682 RHOHQ15669 191 aa11.56□□□□□ -0.56
COL9A1-210ENST00000493682 SGK494Q96LW2 274 aa11.56□□□□□ -0.56
COL9A1-210ENST00000493682 C11orf21Q9P2W6 132 aa11.56□□□□□ -0.56
COL9A1-210ENST00000493682 A0A1W2PPV4 95 aa11.55□□□□□ -0.56
COL9A1-210ENST00000493682 CIDEAO60543 219 aa11.55□□□□□ -0.56
COL9A1-210ENST00000493682 C1QBP02746 253 aa11.55□□□□□ -0.56
COL9A1-210ENST00000493682 ZNF80P51504 273 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-210ENST00000493682 ACOT6Q3I5F7 207 aaPredicted RBP11.55□□□□□ -0.56
COL9A1-210ENST00000493682 LINC00299Q6ZSB3 139 aa11.55□□□□□ -0.56
COL9A1-210ENST00000493682 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
COL9A1-210ENST00000493682 INMT-MINDY4F8WBC2 141 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 HMGB3O15347 200 aaKnown RBP11.54□□□□□ -0.56
COL9A1-210ENST00000493682 PET100P0DJ07 73 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 RAB2AP61019 212 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 WFDC2Q14508 124 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 LAGE3Q14657 143 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 LCE2CQ5TA81 110 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 ATP6V0E2Q8NHE4 81 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 S100ZQ8WXG8 99 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 C9orf85Q96MD7 179 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 NDFIP1Q9BT67 221 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 GTSF1LQ9H1H1 148 aa11.54□□□□□ -0.56
COL9A1-210ENST00000493682 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
COL9A1-210ENST00000493682 UPK1BO75841 260 aa11.53□□□□□ -0.56
COL9A1-210ENST00000493682 TM2D2Q9BX73 214 aa11.53□□□□□ -0.56
COL9A1-210ENST00000493682 TAAR5O14804 337 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 MGST1P10620 155 aaKnown RBP11.52□□□□□ -0.57
COL9A1-210ENST00000493682 ZNF506Q5JVG8 444 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 Q6ZSA8 131 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 Q8N3U1 123 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 TMEM75Q8N9X5 138 aa11.52□□□□□ -0.57
COL9A1-210ENST00000493682 OR10G9Q8NGN4 311 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms