RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 CACNA1HO95180 2353 aa10.16□□□□□ -0.78
PTK7-218ENST00000493339 MBD3L4A6NDZ8 208 aaPredicted RBP10.16□□□□□ -0.78
PTK7-218ENST00000493339 MBD3L3A6NE82 208 aaPredicted RBP10.16□□□□□ -0.78
PTK7-218ENST00000493339 MBD3L5A6NJ08 208 aaPredicted RBP10.16□□□□□ -0.78
PTK7-218ENST00000493339 LINC01619G3V211 115 aa10.16□□□□□ -0.78
PTK7-218ENST00000493339 MBD3L2Q8NHZ7 208 aaPredicted RBP10.16□□□□□ -0.78
PTK7-218ENST00000493339 EP300Q09472 2414 aaPredicted RBP10.16□□□□□ -0.78
PTK7-218ENST00000493339 IGHV3OR16-13A0A075B7E8 117 aa10.15□□□□□ -0.78
PTK7-218ENST00000493339 IGHV3-74A0A0B4J1X5 117 aa10.15□□□□□ -0.78
PTK7-218ENST00000493339 PSMG3-AS1Q96PY0 264 aa10.15□□□□□ -0.78
PTK7-218ENST00000493339 TECTAO75443 2155 aa10.15□□□□□ -0.78
PTK7-218ENST00000493339 TIMM23O14925 209 aa10.15□□□□□ -0.78
PTK7-218ENST00000493339 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
PTK7-218ENST00000493339 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 TRAV12-1A0A0B4J245 112 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 CD7P09564 240 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 NHLRC4P0CG21 123 aaPredicted RBP10.14□□□□□ -0.79
PTK7-218ENST00000493339 C3orf36Q3SXR2 165 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 LYRM7Q5U5X0 104 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 NDUFA11Q86Y39 141 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 OR11H6Q8NGC7 330 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 C21orf62Q9NYP8 219 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 AJUBAQ96IF1 538 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 FAM215AQ9Y5M1 114 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 MAP1AP78559 2803 aaPredicted RBP10.14□□□□□ -0.79
PTK7-218ENST00000493339 F8W735 103 aaPredicted RBP10.14□□□□□ -0.79
PTK7-218ENST00000493339 HES1Q14469 280 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 RASL10AQ92737 203 aa10.14□□□□□ -0.79
PTK7-218ENST00000493339 H7C2G1 150 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 SRSF2Q01130 221 aaKnown RBP10.13□□□□□ -0.79
PTK7-218ENST00000493339 FANCD2OSQ96PS1 177 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 CCDC179H3BU77 68 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 HERV-K104P63124 156 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 GAGE2BQ13066 116 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 GAGE2EQ4V326 116 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 ASCL5Q7RTU5 278 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 SMIM20Q8N5G0 67 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 BAALCQ8WXS3 180 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 GAGE2DQ9UEU5 116 aa10.13□□□□□ -0.79
PTK7-218ENST00000493339 TRAV4A0A0B4J268 109 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 C9JAW5 83 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 TNFRSF13BO14836 293 aaPredicted RBP10.12□□□□□ -0.79
PTK7-218ENST00000493339 RPL39LQ96EH5 51 aaKnown RBP10.12□□□□□ -0.79
PTK7-218ENST00000493339 RAX2Q96IS3 184 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 HIF1ANQ9NWT6 349 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 IGHV7-4-1A0A0J9YVY3 117 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 TMEM262E9PQX1 116 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 CRLF1O75462 422 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 SNCGO76070 127 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 CRIP2P52943 208 aaPredicted RBP10.12□□□□□ -0.79
PTK7-218ENST00000493339 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 Q6ZS46 218 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 VCX2Q9H322 139 aa10.12□□□□□ -0.79
PTK7-218ENST00000493339 LYNX1G3V0Z9 82 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 M0R381 172 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 LYNX1P0DP58 116 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 BSPH1Q075Z2 132 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 TRPT1Q86TN4 253 aaKnown RBP10.11□□□□□ -0.79
PTK7-218ENST00000493339 C1orf210Q8IVY1 113 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 DYNLRB1Q9NP97 96 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 IGHV3-49A0A0A0MS15 119 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 TRBV7-9A0A0J9YWB2 115 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 NBR2O15453 112 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 SLC25A20O43772 301 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 CFC1BP0CG36 223 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 CFC1P0CG37 223 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 ORMDL2Q53FV1 153 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 TOMM6Q96B49 74 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 CITED1Q99966 193 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 COX6B1P14854 86 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
PTK7-218ENST00000493339 SUMO2P61956 95 aaKnown RBP10.11□□□□□ -0.79
PTK7-218ENST00000493339 NUP37Q8NFH4 326 aa10.11□□□□□ -0.79
PTK7-218ENST00000493339 NBASA2RRP1 2371 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 ARHGAP32A7KAX9 2087 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 TTC32Q5I0X7 151 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 GAGE12JA6NER3 117 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 GAGE7O76087 117 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 GAGE12FP0CL80 117 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 GAGE12GP0CL81 117 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 GAGE12IP0CL82 117 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 ARL3P36405 182 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 GAGE4Q13068 117 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 ZNF672Q499Z4 452 aaPredicted RBP10.1□□□□□ -0.79
PTK7-218ENST00000493339 ABCA4P78363 2273 aa10.1□□□□□ -0.79
PTK7-218ENST00000493339 A0A0J9YY99 117 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 RHODO00212 210 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 CTSGP08311 255 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 C10orf126Q8N4M7 172 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 MED13LQ71F56 2210 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 MGPP08493 103 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 NDPQ00604 133 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 LRBAP50851 2863 aa10.09□□□□□ -0.79
PTK7-218ENST00000493339 C11orf86A6NJI1 115 aa10.08□□□□□ -0.8
PTK7-218ENST00000493339 CD59P13987 128 aa10.08□□□□□ -0.8
PTK7-218ENST00000493339 SRD5A1P18405 259 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms