RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 F6UZH7 168 aa9.43□□□□□ -0.9
IRF1-210ENST00000493208 TCRAP04437 139 aa9.43□□□□□ -0.9
IRF1-210ENST00000493208 CRYBA4P53673 196 aa9.43□□□□□ -0.9
IRF1-210ENST00000493208 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
IRF1-210ENST00000493208 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 IFNA7P01567 189 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
IRF1-210ENST00000493208 FLI1Q01543 452 aaPredicted RBP9.42□□□□□ -0.9
IRF1-210ENST00000493208 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 C8orf49Q96NF6 230 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 TCEAL7Q9BRU2 100 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 EPDR1Q9UM22 224 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 DNAH10Q8IVF4 4471 aa9.42□□□□□ -0.9
IRF1-210ENST00000493208 PFN1P07737 140 aaKnown RBP9.41□□□□□ -0.9
IRF1-210ENST00000493208 EVI2AP22794 236 aa9.41□□□□□ -0.9
IRF1-210ENST00000493208 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
IRF1-210ENST00000493208 HIST1H2BAQ96A08 127 aa9.41□□□□□ -0.9
IRF1-210ENST00000493208 MDFICQ9P1T7 246 aa9.41□□□□□ -0.9
IRF1-210ENST00000493208 PSG8Q9UQ74 426 aa9.41□□□□□ -0.9
IRF1-210ENST00000493208 C16orf90A8MZG2 172 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 NXPH4O95158 308 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 GNG5P63218 68 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 EIF5AP63241 154 aaKnown RBP9.4□□□□□ -0.9
IRF1-210ENST00000493208 FHL2Q14192 279 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 PRNTQ86SH4 94 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 HECTD4Q9Y4D8 3996 aa9.4□□□□□ -0.9
IRF1-210ENST00000493208 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
IRF1-210ENST00000493208 IGHV3-16A0A0C4DH30 117 aa9.39□□□□□ -0.91
IRF1-210ENST00000493208 GCGP01275 180 aa9.39□□□□□ -0.91
IRF1-210ENST00000493208 TYMSP04818 313 aa9.39□□□□□ -0.91
IRF1-210ENST00000493208 GYPEP15421 78 aa9.39□□□□□ -0.91
IRF1-210ENST00000493208 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
IRF1-210ENST00000493208 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
IRF1-210ENST00000493208 RPL7L1Q6DKI1 246 aaKnown RBP9.39□□□□□ -0.91
IRF1-210ENST00000493208 ARPC5O15511 151 aa9.38□□□□□ -0.91
IRF1-210ENST00000493208 EIF3GO75821 320 aaKnown RBP eCLIP9.38□□□□□ -0.91
IRF1-210ENST00000493208 UBE2G1P62253 170 aa9.38□□□□□ -0.91
IRF1-210ENST00000493208 NHLRC2Q8NBF2 726 aa9.38□□□□□ -0.91
IRF1-210ENST00000493208 ZNF479Q96JC4 524 aa9.38□□□□□ -0.91
IRF1-210ENST00000493208 NACAE9PAV3 2078 aa9.38□□□□□ -0.91
IRF1-210ENST00000493208 RNF222A6NCQ9 220 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 FABP5P3A8MUU1 101 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 K7EQD1 137 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 GNRH2O43555 120 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 TNP2Q05952 138 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 RHOHQ15669 191 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
IRF1-210ENST00000493208 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 KANTRA0A1W2PQU2 76 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 UMAD1C9J7I0 102 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 SFTA3P0C7M3 94 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 MGST1P10620 155 aaKnown RBP9.36□□□□□ -0.91
IRF1-210ENST00000493208 ERVFC1-1P60608 527 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 ZNF345Q14585 488 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 Q6ZQT7 251 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 SYT8Q8NBV8 401 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 PTH2Q96A98 100 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 FMC1Q96HJ9 113 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
IRF1-210ENST00000493208 A0A0D9SG52 128 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 A8MWV9 139 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 PEX7O00628 323 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 ASIPP42127 132 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 TIRAPP58753 221 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 SGK494Q96LW2 274 aa9.35□□□□□ -0.91
IRF1-210ENST00000493208 PFDN1O60925 122 aa9.34□□□□□ -0.91
IRF1-210ENST00000493208 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
IRF1-210ENST00000493208 FHITP49789 147 aa9.34□□□□□ -0.91
IRF1-210ENST00000493208 LINC00315P59091 139 aa9.34□□□□□ -0.91
IRF1-210ENST00000493208 UBE2G2P60604 165 aa9.34□□□□□ -0.91
IRF1-210ENST00000493208 Q5BKY6 102 aa9.34□□□□□ -0.91
IRF1-210ENST00000493208 TVP23CQ96ET8 276 aa9.34□□□□□ -0.91
IRF1-210ENST00000493208 MUC4Q99102 2169 aa9.33□□□□□ -0.92
IRF1-210ENST00000493208 TEX46H3BTG2 121 aa9.33□□□□□ -0.92
IRF1-210ENST00000493208 CST9LP1Q5W188 147 aa9.33□□□□□ -0.92
IRF1-210ENST00000493208 EIF5AL1Q6IS14 154 aaKnown RBP9.33□□□□□ -0.92
IRF1-210ENST00000493208 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
IRF1-210ENST00000493208 SPATA12Q7Z6I5 190 aa9.33□□□□□ -0.92
IRF1-210ENST00000493208 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
IRF1-210ENST00000493208 FAM74A7A6NL05 159 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 HMSDA8MTL9 139 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 RHODO00212 210 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 CDK2AP2O75956 126 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 SEC11BP0C7V7 166 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 GATA1P15976 413 aaPredicted RBP9.32□□□□□ -0.92
IRF1-210ENST00000493208 LGALSLQ3ZCW2 172 aaPredicted RBP9.32□□□□□ -0.92
IRF1-210ENST00000493208 FAM162BQ5T6X4 162 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 ZFP2Q6ZN57 461 aa9.32□□□□□ -0.92
IRF1-210ENST00000493208 C9orf85Q96MD7 179 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms