RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 ATG2AQ2TAZ0 1938 aa16.5■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 C1orf122Q6ZSJ8 110 aa16.5■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 WI2-2373I1.2A0A1W2PRP0 233 aa16.5■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 MRPL53Q96EL3 112 aaKnown RBP16.5■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 RBMY1BA6NDE4 496 aaKnown RBP16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 RBMY1EA6NEQ0 496 aaKnown RBP16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 RBMY1DP0C7P1 496 aaKnown RBP16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 RBMY1A1P0DJD3 496 aaKnown RBP16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 RBMY1CP0DJD4 496 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 IGLV11-55A0A075B6I3 123 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 EML5Q05BV3 1969 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 H3BMM0 161 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 FGF6P10767 208 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 UBE2WQ96B02 151 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 TCF15Q12870 199 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 WFDC2Q14508 124 aa16.49■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 FOXE3Q13461 319 aa16.48■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 TRAV8-3A0A0A6YYJ7 113 aa16.48■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 J3QQQ9 107 aa16.48■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 NPBQ8NG41 125 aa16.48■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 LOXL1Q08397 574 aaPredicted RBP16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 A0A1W2PNU3 283 aaPredicted RBP16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 SLC25A20O43772 301 aa16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 ODF1Q14990 250 aa16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 SPANXA1Q9NS26 97 aa16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 LENEPQ9Y5L5 61 aa16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 TNCP24821 2201 aa16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 SP5Q6BEB4 398 aaPredicted RBP16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 NDUFA4O00483 81 aa16.47■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 PRR30Q53SZ7 412 aaPredicted RBP16.46■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 SEM1Q6ZVN7 128 aa16.46■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 C1QTNF4Q9BXJ3 329 aa16.46■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 WT1P19544 449 aaPredicted RBP16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 RASL10AQ92737 203 aa16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 I3L3M4 83 aa16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 IGLV1-47P01700 117 aa16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 PF4P02776 101 aa16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 BPESC1Q9GZL8 116 aa16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 CTSGP08311 255 aa16.45■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 ZNF415Q09FC8 603 aa16.44■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 TRGV2A0A075B6R0 118 aa16.43■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 PLCE1Q9P212 2302 aa16.43■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 Q8N976 141 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 WISP2O76076 250 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 TRAV12-1A0A0B4J245 112 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 ADARB2-AS1A8MUL3 147 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 CPAMD8Q8IZJ3 1885 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 MYCNOSP40205 109 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 STHQ8IWL8 128 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 IGFBPL1Q8WX77 278 aa16.42■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 LRP4O75096 1905 aa16.41■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 IGHV1-69DA0A0B4J2H0 117 aa16.41■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 C1orf159Q96HA4 380 aa16.4■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 RUSC1-AS1Q66K80 236 aa16.4■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 BUB3O43684 328 aa16.4■□□□□ 0.22
CHKB-CPT1B-203ENST00000492556 PCNX2A6NKB5 2137 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 CRPP02741 224 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 IGHV1OR15-1A0A075B7D0 117 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PRAC2D3DTV9 90 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 GNRH2O43555 120 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 CFC1BP0CG36 223 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 CFC1P0CG37 223 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 IFITM1P13164 125 aa16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 RPL39LQ96EH5 51 aaKnown RBP16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 ZNF48Q96MX3 618 aaPredicted RBP16.39■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 IGHV7-81A0A0B4J1V7 117 aa16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 SRSF2Q01130 221 aaKnown RBP16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 LINC00158P58513 81 aa16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 RPL36AP83881 106 aaKnown RBP16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 RPL36ALQ969Q0 106 aaKnown RBP16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 NDUFA12Q9UI09 145 aa16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 DPH3Q96FX2 82 aa16.38■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 SPINK13Q1W4C9 94 aa16.37■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 NTN5Q8WTR8 489 aaPredicted RBP16.37■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 KLK9Q9UKQ9 250 aa16.37■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PIP4P1Q86T03 277 aa16.37■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PRIMA1Q86XR5 153 aa16.37■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PHLDA1Q8WV24 401 aaPredicted RBP16.36■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 MED13LQ71F56 2210 aa16.36■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 SPRY2O43597 315 aa16.36■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 HOXB4P17483 251 aaPredicted RBP16.36■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 LEPROTO15243 131 aa16.35■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 IGHV1-69P01742 117 aa16.35■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.35■□□□□ 0.216e-9■■■■□ 19.5
CHKB-CPT1B-203ENST00000492556 TEN1Q86WV5 123 aa16.35■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 FOXI1Q12951 378 aa16.35■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 LGALS1P09382 135 aaKnown RBP16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 KLHL30-AS1Q8NEE0 82 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 IGHV7-4-1A0A0J9YVY3 117 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 E9PLD3 99 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 F6UB75 175 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 RHOHQ15669 191 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 TOMM6Q96B49 74 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 PRR14LQ5THK1 2151 aa16.34■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 OVOL2Q9BRP0 275 aa16.33■□□□□ 0.21
CHKB-CPT1B-203ENST00000492556 TRAV13-1A0A0B4J241 112 aa16.33■□□□□ 0.2
CHKB-CPT1B-203ENST00000492556 SYNJ2BPP57105 145 aa16.33■□□□□ 0.2
CHKB-CPT1B-203ENST00000492556 ZGRF1Q86YA3 2104 aa16.33■□□□□ 0.2
CHKB-CPT1B-203ENST00000492556 HCFC1P51610 2035 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms