RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
LIMK1-207ENST00000491052 ZFP30Q9Y2G7 519 aa9.08□□□□□ -0.96
LIMK1-207ENST00000491052 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
LIMK1-207ENST00000491052 TRGV2A0A075B6R0 118 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 GNRH2O43555 120 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 LY6G6CO95867 125 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 TYMSP04818 313 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 BCL2P10415 239 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 BLOC1S1P78537 153 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 TDRG1Q3Y452 100 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 LINC00476Q8WZB0 136 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 ZC2HC1AQ96GY0 325 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 NDUFAF3Q9BU61 184 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 MRPL16Q9NX20 251 aaKnown RBP9.07□□□□□ -0.96
LIMK1-207ENST00000491052 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
LIMK1-207ENST00000491052 SPINK4O60575 86 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 LTAP01374 205 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 S100A9P06702 114 aaKnown RBP9.06□□□□□ -0.96
LIMK1-207ENST00000491052 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
LIMK1-207ENST00000491052 TMEM88Q6PEY1 159 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 NHLRC2Q8NBF2 726 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 FAM210BQ96KR6 192 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 C11orf21Q9P2W6 132 aa9.06□□□□□ -0.96
LIMK1-207ENST00000491052 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 FABP5P3A8MUU1 101 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 SH2D1AO60880 128 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 C11orf52Q96A22 123 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 SPXQ9BT56 116 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 ALMS1Q8TCU4 4167 aa9.05□□□□□ -0.96
LIMK1-207ENST00000491052 M0R036 132 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 PDE6DO43924 150 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 ORM1P02763 201 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 TAGLN2P37802 199 aaKnown RBP9.04□□□□□ -0.96
LIMK1-207ENST00000491052 RPL35P42766 123 aaKnown RBP9.04□□□□□ -0.96
LIMK1-207ENST00000491052 OR5I1Q13606 314 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 LGALS9BQ3B8N2 356 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 FAM162BQ5T6X4 162 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 BAGE2Q86Y30 109 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 DERL1Q9BUN8 251 aa9.04□□□□□ -0.96
LIMK1-207ENST00000491052 B4DEV8 164 aa9.03□□□□□ -0.96
LIMK1-207ENST00000491052 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
LIMK1-207ENST00000491052 CRIP1P50238 77 aa9.03□□□□□ -0.96
LIMK1-207ENST00000491052 COX8CQ7Z4L0 72 aa9.03□□□□□ -0.96
LIMK1-207ENST00000491052 IGKV3D-20A0A0C4DH25 116 aa9.02□□□□□ -0.97
LIMK1-207ENST00000491052 M0R2P5 195 aa9.02□□□□□ -0.97
LIMK1-207ENST00000491052 HOXA5P20719 270 aa9.02□□□□□ -0.97
LIMK1-207ENST00000491052 S100A4P26447 101 aaKnown RBP9.02□□□□□ -0.97
LIMK1-207ENST00000491052 CENPWQ5EE01 88 aa9.02□□□□□ -0.97
LIMK1-207ENST00000491052 LGALS9CQ6DKI2 356 aa9.02□□□□□ -0.97
LIMK1-207ENST00000491052 MED9Q9NWA0 146 aa9.02□□□□□ -0.97
LIMK1-207ENST00000491052 TRAV26-1A0A087WT03 109 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 A0A0J9YY99 117 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 RBFOX3A6NFN3 312 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 NUDT3O95989 172 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 ASIPP42127 132 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 ZNF674Q2M3X9 581 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 PRR27Q6MZM9 219 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 C15orf53Q8NAA6 179 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 C18orf15Q96N68 181 aa9.01□□□□□ -0.97
LIMK1-207ENST00000491052 KMT2CQ8NEZ4 4911 aaKnown RBP9.01□□□□□ -0.97
LIMK1-207ENST00000491052 PLECQ15149 4684 aaKnown RBP9□□□□□ -0.97
LIMK1-207ENST00000491052 RAB19A4D1S5 217 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 C9JCJ5 164 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 H3BVH4 76 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 MGST1P10620 155 aaKnown RBP9□□□□□ -0.97
LIMK1-207ENST00000491052 RNASE3P12724 160 aaKnown RBP9□□□□□ -0.97
LIMK1-207ENST00000491052 GNG4P50150 75 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 ZNF876PQ49A33 203 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 TOR2AQ5JU69 321 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 TEX261Q6UWH6 196 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 LYPD6BQ8NI32 183 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 RASL10AQ92737 203 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 C9orf85Q96MD7 179 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 MLST8Q9BVC4 326 aa9□□□□□ -0.97
LIMK1-207ENST00000491052 GRIFINA4D1Z8 144 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 SFTA3P0C7M3 94 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 P0DMU3 169 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 FAM231AP0DMU4 169 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 FAM231CP0DMU5 169 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 ZNF506Q5JVG8 444 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 UBE2DNLQ8IWF7 75 aa8.99□□□□□ -0.97
LIMK1-207ENST00000491052 PCNPQ8WW12 178 aaKnown RBP8.99□□□□□ -0.97
LIMK1-207ENST00000491052 TRAV4A0A0B4J268 109 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 TRGV4A0A0C4DH28 118 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 CEBPGP53567 150 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 ZNF479Q96JC4 524 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 EIF5A2Q9GZV4 153 aaKnown RBP8.98□□□□□ -0.97
LIMK1-207ENST00000491052 DNAH1Q9P2D7 4330 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 LYSTQ99698 3801 aa8.98□□□□□ -0.97
LIMK1-207ENST00000491052 TRBV20OR9-2A0A075B6H5 130 aa8.97□□□□□ -0.97
LIMK1-207ENST00000491052 PGPEP1LA6NFU8 196 aa8.97□□□□□ -0.97
LIMK1-207ENST00000491052 RPL19P84098 196 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms