RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SPINK13Q1W4C9 94 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 RNF152Q8N8N0 203 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 ZNF580Q9UK33 172 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 RNF114Q9Y508 228 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 RANBP2P49792 3224 aaKnown RBP5.62□□□□□ -1.51
NPHP3-208ENST00000490993 A8MWV9 139 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 GDF5OSQ5U4N7 250 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 ODF3Q96PU9 254 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 ARFGEF3Q5TH69 2177 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 TNCP24821 2201 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 WNK2Q9Y3S1 2297 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 H3BRM9 83 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 SNAI2O43623 268 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 IGLL1P15814 213 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 FXYD7P58549 80 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 RNF151Q2KHN1 245 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 C4orf3Q8WVX3 66 aa5.62□□□□□ -1.51
NPHP3-208ENST00000490993 TRBV12-3P01733 135 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 RNF224P0DH78 156 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 ZNF876PQ49A33 203 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 TMEM101Q96IK0 257 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 TSSC4Q9Y5U2 329 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-208ENST00000490993 SPTBN1Q01082 2364 aaKnown RBP5.61□□□□□ -1.51
NPHP3-208ENST00000490993 SPXQ9BT56 116 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 SNHG12Q9BXW3 62 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 IGHV4OR15-8A0A075B7B6 117 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 A0A087WW49 117 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 A0A087WWL8 130 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 F6UB75 175 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 EREGO14944 169 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 COX8AP10176 69 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 NSUN5P1Q3KNT7 163 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 C11orf44Q8N8P7 122 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 C2orf70A6NJV1 201 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 LINC01545Q5VT33 79 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 GTSCR1Q86UQ5 136 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 SPAG8Q99932 426 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-208ENST00000490993 U3KQE9 123 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 CRIP1P50238 77 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 ZNF80P51504 273 aaPredicted RBP5.61□□□□□ -1.51
NPHP3-208ENST00000490993 CIRBPQ14011 172 aaKnown RBP5.61□□□□□ -1.51
NPHP3-208ENST00000490993 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 RAB37Q96AX2 223 aa5.61□□□□□ -1.51
NPHP3-208ENST00000490993 TRAV25A0A0B4J276 109 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 C19orf54Q5BKX5 351 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 GATD1Q8NB37 220 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 VPS25Q9BRG1 176 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 TRGV2A0A075B6R0 118 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 SIVA1O15304 175 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 GNRH2O43555 120 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 TP53TG3Q9ULZ0 132 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 F8W735 103 aaPredicted RBP5.6□□□□□ -1.51
NPHP3-208ENST00000490993 I3L3M4 83 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 PSMB2P49721 201 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 COX8CQ7Z4L0 72 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 KLK9Q9UKQ9 250 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 TRAV8-2A0A0B4J237 113 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 CD28P10747 220 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 U3KQK5 164 aa5.6□□□□□ -1.51
NPHP3-208ENST00000490993 CLPSL1A2RUU4 121 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 PSMB8P28062 276 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 SPATA12Q7Z6I5 190 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 MSRB1Q9NZV6 116 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 TRAV12-2A0A075B6T6 113 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 CD5LO43866 347 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 MPV17L2Q567V2 206 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 IGKV3D-20A0A0C4DH25 116 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 KNCNA6PVL3 124 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 K7ERU9 68 aa5.59□□□□□ -1.51
NPHP3-208ENST00000490993 RPL36AP83881 106 aaKnown RBP5.59□□□□□ -1.51
NPHP3-208ENST00000490993 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.51
NPHP3-208ENST00000490993 SLURP1P55000 103 aa5.59□□□□□ -1.52
NPHP3-208ENST00000490993 PSMG3-AS1Q96PY0 264 aa5.59□□□□□ -1.52
NPHP3-208ENST00000490993 MCRIP2Q9BUT9 160 aaKnown RBP5.59□□□□□ -1.52
NPHP3-208ENST00000490993 A0A087WX48 190 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 TRAV2A0A0B4J234 112 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 A0A0J9YX75 114 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 M0R2P5 195 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 CCL24O00175 119 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 RHOHQ15669 191 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 PLEKHB2Q96CS7 222 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 ZNF815PA8K554 130 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 HLA-DRB4P13762 266 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 PMVKQ15126 192 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 STPG4Q8N801 248 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 TP53TG1Q9Y2A0 90 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 HLA-DRB4X5D2U9 266 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 DLEU1O43261 78 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 TRGV1A0A0A0MS02 117 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 F8VRH5 84 aa5.58□□□□□ -1.52
NPHP3-208ENST00000490993 SNCGO76070 127 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 PRADC1Q9BSG0 188 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 C20orf173Q96LM9 149 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 TRGV4A0A0C4DH28 118 aa5.57□□□□□ -1.52
NPHP3-208ENST00000490993 COX6CP09669 75 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms