RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 GNRH2O43555 120 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 TYMSP04818 313 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 SEC11BP0C7V7 166 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 ZNF80P51504 273 aaPredicted RBP10.53□□□□□ -0.72
COL27A1-206ENST00000490831 FHL2Q14192 279 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 ESRGQ1W209 222 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 MAP1LC3BQ9GZQ8 125 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 SDF2L1Q9HCN8 221 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 PRO0255Q9UI72 69 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 NAGKQ9UJ70 344 aa10.53□□□□□ -0.72
COL27A1-206ENST00000490831 NBDYA0A0U1RRE5 68 aa10.52□□□□□ -0.73
COL27A1-206ENST00000490831 PFN1P07737 140 aaKnown RBP10.52□□□□□ -0.73
COL27A1-206ENST00000490831 FGF8P55075 233 aaPredicted RBP10.52□□□□□ -0.73
COL27A1-206ENST00000490831 SMUG1Q53HV7 270 aa10.52□□□□□ -0.73
COL27A1-206ENST00000490831 SAPCD1Q5SSQ6 148 aa10.52□□□□□ -0.73
COL27A1-206ENST00000490831 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.73
COL27A1-206ENST00000490831 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.73
COL27A1-206ENST00000490831 UMAD1C9J7I0 102 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 M0R2P5 195 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 PAX4O43316 350 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 BCL2L11O43521 198 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 GCGP01275 180 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 IGHV3-53P01767 116 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 FHITP49789 147 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 CRYBA4P53673 196 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 UBE2G2P60604 165 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 SOHLH1Q5JUK2 328 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 C1orf134Q5TEV5 83 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 PRNTQ86SH4 94 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 HIST1H2BAQ96A08 127 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 HHLA3Q9XRX5 114 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 ARL2-SNX15V9GYD0 113 aa10.51□□□□□ -0.73
COL27A1-206ENST00000490831 PKHD1P08F94 4074 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 PRSS29PA6NIE9 313 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 PEX7O00628 323 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 IFNA7P01567 189 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 COX8CQ7Z4L0 72 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 STOML3Q8TAV4 291 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 MBD3L1Q8WWY6 194 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 ZNF479Q96JC4 524 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 Q9H8V8 135 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
COL27A1-206ENST00000490831 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
COL27A1-206ENST00000490831 TRAV34A0A0B4J273 112 aa10.49□□□□□ -0.73
COL27A1-206ENST00000490831 KANTRA0A1W2PQU2 76 aa10.49□□□□□ -0.73
COL27A1-206ENST00000490831 PPT1P50897 306 aa10.49□□□□□ -0.73
COL27A1-206ENST00000490831 PTH2Q96A98 100 aa10.49□□□□□ -0.73
COL27A1-206ENST00000490831 ZNF471Q9BX82 626 aaPredicted RBP10.49□□□□□ -0.73
COL27A1-206ENST00000490831 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
COL27A1-206ENST00000490831 EIF5AP63241 154 aaKnown RBP10.48□□□□□ -0.73
COL27A1-206ENST00000490831 DPPA3Q6W0C5 159 aa10.48□□□□□ -0.73
COL27A1-206ENST00000490831 Q86TA4 180 aa10.48□□□□□ -0.73
COL27A1-206ENST00000490831 C9orf85Q96MD7 179 aa10.48□□□□□ -0.73
COL27A1-206ENST00000490831 PKD1P98161 4303 aa10.48□□□□□ -0.73
COL27A1-206ENST00000490831 DYNC1H1Q14204 4646 aaKnown RBP10.47□□□□□ -0.73
COL27A1-206ENST00000490831 TRGV4A0A0C4DH28 118 aa10.47□□□□□ -0.73
COL27A1-206ENST00000490831 TRBV6-1A0A0K0K1D8 114 aa10.47□□□□□ -0.73
COL27A1-206ENST00000490831 MRPL23Q16540 153 aaKnown RBP10.47□□□□□ -0.73
COL27A1-206ENST00000490831 TTC32Q5I0X7 151 aa10.47□□□□□ -0.73
COL27A1-206ENST00000490831 TMUB2Q71RG4 321 aa10.47□□□□□ -0.73
COL27A1-206ENST00000490831 ZFP30Q9Y2G7 519 aa10.47□□□□□ -0.73
COL27A1-206ENST00000490831 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
COL27A1-206ENST00000490831 A0A1W2PPQ1 181 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 RNASE3P12724 160 aaKnown RBP10.46□□□□□ -0.73
COL27A1-206ENST00000490831 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 OR4C5Q8NGB2 326 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 FAM213BQ8TBF2 198 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 SFT2D1Q8WV19 159 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 FMC1Q96HJ9 113 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 KRTAP1-5Q9BYS1 174 aa10.46□□□□□ -0.73
COL27A1-206ENST00000490831 HERC2O95714 4834 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 IGKV3D-20A0A0C4DH25 116 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 FABP5P3A8MUU1 101 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 K7EQD1 137 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 CIDEAO60543 219 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 ORM1P02763 201 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 TPT1P13693 172 aaKnown RBP10.45□□□□□ -0.74
COL27A1-206ENST00000490831 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
COL27A1-206ENST00000490831 LGALSLQ3ZCW2 172 aaPredicted RBP10.45□□□□□ -0.74
COL27A1-206ENST00000490831 ZNF876PQ49A33 203 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 Q6ZNX1 250 aa10.45□□□□□ -0.74
COL27A1-206ENST00000490831 RS1O15537 224 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 PAGE4O60829 102 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 PFDN1O60925 122 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 LTAP01374 205 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 GATA1P15976 413 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-206ENST00000490831 CRIP1P50238 77 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 CST9LP1Q5W188 147 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 LYPD5Q6UWN5 251 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 NEGR1Q7Z3B1 354 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 ZC2HC1AQ96GY0 325 aa10.44□□□□□ -0.74
COL27A1-206ENST00000490831 H2AFB1P0C5Y9 115 aa10.43□□□□□ -0.74
COL27A1-206ENST00000490831 GYPEP15421 78 aa10.43□□□□□ -0.74
COL27A1-206ENST00000490831 UBE2G1P62253 170 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms