RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 TDRG1Q3Y452 100 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 TCTEX1D4Q5JR98 221 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 C9orf66Q5T8R8 295 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 FAM231DQ6ZW35 169 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 ZNF491Q8N8L2 437 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 OR11H1Q8NG94 326 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 CACNG8Q8WXS5 425 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 IGF2BP2-AS1Q96M15 143 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 CHRDL1Q9BU40 450 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 PLEKHA3Q9HB20 300 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 NRN1Q9NPD7 142 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 OR51B2Q9Y5P1 312 aa3.58□□□□□ -1.84
CSTF1-205ENST00000490539 IGHV4OR15-8A0A075B7B6 117 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 TRBV7-1A0A0A6YYK4 115 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 SRRM4A7MD48 611 aaKnown RBP3.57□□□□□ -1.84
CSTF1-205ENST00000490539 GGTLC3B5MD39 225 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 OVOL1O14753 267 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 OR7C2O60412 319 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 OR2J3O76001 311 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 CRYGBP07316 175 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 FRMD6-AS1P0C7T7 363 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 APELAP0DMC3 54 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 IGLC2P0DOY2 106 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 IGLC3P0DOY3 106 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 RNASE2P10153 161 aaKnown RBP3.57□□□□□ -1.84
CSTF1-205ENST00000490539 TNCP24821 2201 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 SRIP30626 198 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 RHOGP84095 191 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 PMCHL1Q16048 86 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 FAM106AQ4KMX7 169 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 SPATA45Q537H7 98 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 IBA57Q5T440 356 aaKnown RBP3.57□□□□□ -1.84
CSTF1-205ENST00000490539 FAM162BQ5T6X4 162 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 C10orf99Q6UWK7 81 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 NIT1Q86X76 327 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 TTC9CQ8N5M4 171 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 WFDC9Q8NEX5 89 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 OR1L4Q8NGR5 311 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 TSKUQ8WUA8 353 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 SMIM12Q96EX1 92 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 GRAMD2BQ96HH9 432 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 ATP6V0BQ99437 205 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 RNASE7Q9H1E1 156 aaKnown RBP3.57□□□□□ -1.84
CSTF1-205ENST00000490539 ZNF331Q9NQX6 463 aaPredicted RBP3.57□□□□□ -1.84
CSTF1-205ENST00000490539 PEF1Q9UBV8 284 aaKnown RBP3.57□□□□□ -1.84
CSTF1-205ENST00000490539 ZFP30Q9Y2G7 519 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 CBY1Q9Y3M2 126 aa3.57□□□□□ -1.84
CSTF1-205ENST00000490539 PLXNB1O43157 2135 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 IGKV1OR2-108A0A075B7D4 117 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 TEX50A0A1B0GTY4 177 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 CORTO00230 105 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 PEX7O00628 323 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 HYPMO75409 117 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 SAP30O75446 220 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 IGHV3-11P01762 117 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 MGST1P10620 155 aaKnown RBP3.56□□□□□ -1.84
CSTF1-205ENST00000490539 IGLL1P15814 213 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 PMCHP20382 165 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 BMI1P35226 326 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 HNRNPA3P51991 378 aaKnown RBP3.56□□□□□ -1.84
CSTF1-205ENST00000490539 TCL1AP56279 114 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 NDPQ00604 133 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 DEFB136Q30KP8 78 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 C15orf32Q32M92 178 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 KIAA1644Q3SXP7 199 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 ETFRF1Q6IPR1 90 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 MRPL54Q6P161 138 aaKnown RBP3.56□□□□□ -1.84
CSTF1-205ENST00000490539 ATP5L2Q7Z4Y8 100 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 C18orf32Q8TCD1 76 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 MYOZ3Q8TDC0 251 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 ORAOV1Q8WV07 137 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 BORCS7Q96B45 105 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 RCHY1Q96PM5 261 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 TXN2Q99757 166 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 FAM110AQ9BQ89 295 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 SPXQ9BT56 116 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 SLC25A2Q9BXI2 301 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 DNAJC4Q9NNZ3 241 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 LAMTOR2Q9Y2Q5 125 aa3.56□□□□□ -1.84
CSTF1-205ENST00000490539 MRPS16Q9Y3D3 137 aaKnown RBP3.56□□□□□ -1.84
CSTF1-205ENST00000490539 TRAV9-2A0A087WT02 112 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 A0A1B0GXF2 115 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 G3V4G9 280 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 COX7A2P2O60397 106 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 SPINK4O60575 86 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 CRYGCP07315 174 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 HIST1H1EP10412 219 aaKnown RBP3.55□□□□□ -1.84
CSTF1-205ENST00000490539 MYOD1P15172 320 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 GATA2P23769 480 aaPredicted RBP3.55□□□□□ -1.84
CSTF1-205ENST00000490539 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
CSTF1-205ENST00000490539 UBE2L3P68036 154 aaKnown RBP3.55□□□□□ -1.84
CSTF1-205ENST00000490539 BATFQ16520 125 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 DEFB121Q5J5C9 76 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 C10orf55Q5SWW7 151 aa3.55□□□□□ -1.84
CSTF1-205ENST00000490539 C10orf113Q5VZT2 155 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms