RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 NPYP01303 97 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 CFHR4Q92496 578 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 WT1-ASQ06250 92 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 LHBP01229 141 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 TCF15Q12870 199 aa7.02□□□□□ -1.29
LSAMP-205ENST00000490035 FXYD7P58549 80 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 ANXA2RQ3ZCQ2 193 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 PRSS57Q6UWY2 283 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 ZC2HC1AQ96GY0 325 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 RSPO3Q9BXY4 272 aaPredicted RBP7.01□□□□□ -1.29
LSAMP-205ENST00000490035 ORMDL1Q9P0S3 153 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 TMEM213A2RRL7 107 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 ZNF491Q8N8L2 437 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 FUSP35637 526 aaKnown RBP eCLIP7.01□□□□□ -1.29
LSAMP-205ENST00000490035 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 C16orf74Q96GX8 76 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 C9JQL5 133 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 CXCL5P42830 114 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 PROK2Q9HC23 129 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 SCRT2Q9NQ03 307 aa7.01□□□□□ -1.29
LSAMP-205ENST00000490035 KLF2Q9Y5W3 355 aaPredicted RBP7.01□□□□□ -1.29
LSAMP-205ENST00000490035 MRPL35Q9NZE8 188 aaKnown RBP7.01□□□□□ -1.29
LSAMP-205ENST00000490035 Q6ZR03 302 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 XCL2Q9UBD3 114 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 C9orf66Q5T8R8 295 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 CYYR1Q96J86 154 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 TRBV6-1A0A0K0K1D8 114 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE12JA6NER3 117 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE4Q13068 117 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE5Q13069 117 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 Q6ZWC4 215 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 IGFL2Q6UWQ7 119 aa7□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE12HA6NDE8 117 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 NDUFS7O75251 213 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 KRTAP27-1Q3LI81 207 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 MED13LQ71F56 2210 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 PDE6GP18545 87 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 WDR86Q86TI4 376 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 IGLL1P15814 213 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 ZNF726P1Q15940 193 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 RNF223E7ERA6 249 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 MLANAQ16655 118 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 PIP4P1Q86T03 277 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 WNK1Q9H4A3 2382 aa6.99□□□□□ -1.29
LSAMP-205ENST00000490035 IGLC7A0M8Q6 106 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 EGR2P11161 476 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-205ENST00000490035 ANGP03950 147 aaKnown RBP6.98□□□□□ -1.29
LSAMP-205ENST00000490035 ATP5G1P05496 136 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 HOXB4P17483 251 aaPredicted RBP6.98□□□□□ -1.29
LSAMP-205ENST00000490035 Q96MF0 132 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 TRAV12-1A0A0B4J245 112 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 K7EMT4 169 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 CARD19Q96LW7 228 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 IGKV1-39P01597 117 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 IGKV1D-39P04432 117 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 PFN2P35080 140 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 JMJD7-PLA2G4BH0Y9G9 81 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 C12orf74Q32Q52 190 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 KLHDC3Q9BQ90 382 aa6.98□□□□□ -1.29
LSAMP-205ENST00000490035 CFC1BP0CG36 223 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 CFC1P0CG37 223 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 CR1LQ2VPA4 569 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 PRR14LQ5THK1 2151 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 NBL1P41271 181 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 MRPL23Q16540 153 aaKnown RBP6.97□□□□□ -1.29
LSAMP-205ENST00000490035 LY6G6EA0A0G2JKS1 128 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 U3KQA8 63 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 KIR2DL5BA0A0G2JN68 375 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 KIR2DL5BA0A0G2JPC4 375 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 CCL24O00175 119 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 RNF144BQ7Z419 303 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 KIR2DL5AQ8N109 375 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 RNF138Q8WVD3 245 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 ZNF625Q96I27 306 aaPredicted RBP6.97□□□□□ -1.29
LSAMP-205ENST00000490035 ATOX1O00244 68 aa6.97□□□□□ -1.29
LSAMP-205ENST00000490035 HAMPP81172 84 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 PRSS29PA6NIE9 313 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE7O76087 117 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE12FP0CL80 117 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE12GP0CL81 117 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 GAGE12IP0CL82 117 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 RUSC1-AS1Q66K80 236 aa6.96□□□□□ -1.29
LSAMP-205ENST00000490035 LINC00205P59089 165 aa6.96□□□□□ -1.3
LSAMP-205ENST00000490035 G3V318 75 aa6.96□□□□□ -1.3
LSAMP-205ENST00000490035 CCL25O15444 150 aa6.96□□□□□ -1.3
LSAMP-205ENST00000490035 GAGE6Q13070 117 aa6.96□□□□□ -1.3
LSAMP-205ENST00000490035 KLK9Q9UKQ9 250 aa6.96□□□□□ -1.3
LSAMP-205ENST00000490035 RSPO1Q2MKA7 263 aaPredicted RBP6.96□□□□□ -1.3
LSAMP-205ENST00000490035 MRPL36Q9P0J6 103 aaKnown RBP6.96□□□□□ -1.3
LSAMP-205ENST00000490035 ZNF581Q9P0T4 197 aa6.96□□□□□ -1.3
LSAMP-205ENST00000490035 DEFB125Q8N687 156 aa6.95□□□□□ -1.3
LSAMP-205ENST00000490035 C9orf47Q6ZRZ4 202 aa6.95□□□□□ -1.3
LSAMP-205ENST00000490035 TNRC6BQ9UPQ9 1833 aaKnown RBP6.95□□□□□ -1.3
LSAMP-205ENST00000490035 IGFL4Q6B9Z1 124 aa6.95□□□□□ -1.3
LSAMP-205ENST00000490035 NAA38Q9BRA0 125 aaKnown RBP6.95□□□□□ -1.3
LSAMP-205ENST00000490035 TM2D2Q9BX73 214 aa6.95□□□□□ -1.3
LSAMP-205ENST00000490035 IGLV11-55A0A075B6I3 123 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms