RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 RIGQ13278 110 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 SHISA2Q6UWI4 295 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 ZNF738Q8NE65 137 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 OR10J6PQ8NGY7 276 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 ALKBH7Q9BT30 221 aaPredicted RBP8.8□□□□□ -1
TRIM40-208ENST00000489892 ZNF747Q9BV97 191 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
TRIM40-208ENST00000489892 M0R3E3 92 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 SPINK4O60575 86 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 CT45A10P0DMU9 189 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 DEFB114Q30KQ6 69 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 TMEM78Q5T7P6 136 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 COX8CQ7Z4L0 72 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 DCANP1Q8TF63 244 aa8.79□□□□□ -1
TRIM40-208ENST00000489892 TRAV8-2A0A0B4J237 113 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 TRBV7-9A0A0J9YWB2 115 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 K7EQG2 157 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 SAP30O75446 220 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 CA1P00915 261 aaPredicted RBP8.78□□□□□ -1
TRIM40-208ENST00000489892 OR5AL1P0C617 328 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 KRTAP10-3P60369 221 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 RPS20P60866 119 aaKnown RBP8.78□□□□□ -1
TRIM40-208ENST00000489892 KRTDAPP60985 99 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 LINC00477Q96M19 166 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 LENEPQ9Y5L5 61 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 WNK1Q9H4A3 2382 aa8.78□□□□□ -1
TRIM40-208ENST00000489892 IGKV3-7A0A075B6H7 116 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 IGLV2-11P01706 119 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 EBLN2Q6P2I7 272 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 C9orf47Q6ZRZ4 202 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 PRNTQ86SH4 94 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 NIT1Q86X76 327 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 TMEM61Q8N0U2 210 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 RNF182Q8N6D2 247 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 PPP1R14DQ9NXH3 145 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 PSG8Q9UQ74 426 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 NBEAL2Q6ZNJ1 2754 aa8.77□□□□□ -1.01
TRIM40-208ENST00000489892 TRRAPQ9Y4A5 3859 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 A0A1B0GUT8 65 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 F2Z2F3 143 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 M0R2Z0 102 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 DUSP14O95147 198 aaKnown RBP8.76□□□□□ -1.01
TRIM40-208ENST00000489892 FRMD6-AS1P0C7T7 363 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 ZNF138P52744 262 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 NUTF2P61970 127 aaKnown RBP8.76□□□□□ -1.01
TRIM40-208ENST00000489892 CD300EQ496F6 205 aaPredicted RBP8.76□□□□□ -1.01
TRIM40-208ENST00000489892 C9orf66Q5T8R8 295 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 ADAMTSL5Q6ZMM2 481 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 OR2D3Q8NGH3 330 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 RCHY1Q96PM5 261 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 UQCR10Q9UDW1 63 aa8.76□□□□□ -1.01
TRIM40-208ENST00000489892 IGKV2-40A0A087WW87 121 aaPredicted RBP8.75□□□□□ -1.01
TRIM40-208ENST00000489892 LOC102724200A0A096LPH7 203 aaPredicted RBP8.75□□□□□ -1.01
TRIM40-208ENST00000489892 IGKV2D-40P01614 121 aaPredicted RBP8.75□□□□□ -1.01
TRIM40-208ENST00000489892 IGLV1-51P01701 117 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 C3orf79P0CE67 100 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 BTF3P20290 206 aaKnown RBP8.75□□□□□ -1.01
TRIM40-208ENST00000489892 CTRLP40313 264 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 TFPI2P48307 235 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 CAMPP49913 170 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 PSMG4Q5JS54 123 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 FOXI2Q6ZQN5 318 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 WFDC3Q8IUB2 231 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 Q8N976 141 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 OR8A1Q8NGG7 326 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 ODF3Q96PU9 254 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 FAM110AQ9BQ89 295 aa8.75□□□□□ -1.01
TRIM40-208ENST00000489892 CD33P20138 364 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 NTF3P20783 257 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 EDN2P20800 178 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 PRR31Q5SQ13 230 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 GDF5OSQ5U4N7 250 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 IGFL4Q6B9Z1 124 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 RNASEKQ6P5S7 137 aaKnown RBP8.74□□□□□ -1.01
TRIM40-208ENST00000489892 ZNF705AQ6ZN79 300 aaPredicted RBP8.74□□□□□ -1.01
TRIM40-208ENST00000489892 GTSF1Q8WW33 167 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 PGLYRP4Q96LB8 373 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 PRR25Q96S07 402 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 PAM16Q9Y3D7 125 aa8.74□□□□□ -1.01
TRIM40-208ENST00000489892 TRAV8-1A0A0A6YYK1 113 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 A0A1B0GV90 55 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 CRXO43186 299 aaPredicted RBP8.73□□□□□ -1.01
TRIM40-208ENST00000489892 HLA-DMBP28068 263 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 TSPOP30536 169 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
TRIM40-208ENST00000489892 SPATA45Q537H7 98 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 LINC00322Q6ZN03 302 aaPredicted RBP8.73□□□□□ -1.01
TRIM40-208ENST00000489892 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 ZC2HC1AQ96GY0 325 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 C20orf173Q96LM9 149 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 TMEM70Q9BUB7 260 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 SNHG12Q9BXW3 62 aa8.73□□□□□ -1.01
TRIM40-208ENST00000489892 EREGO14944 169 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 LEPP41159 167 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 WFDC9Q8NEX5 89 aa8.72□□□□□ -1.01
TRIM40-208ENST00000489892 ASCL2Q99929 193 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms