RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 IGHV3-64DA0A0J9YX35 117 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 A0A0J9YY99 117 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 RBAKDNA6NC62 111 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 MRPS12O15235 138 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 LINC01565O15544 149 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 SH2D1AO60880 128 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV3-13P01766 116 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV3-33P01772 117 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 TFF1P04155 84 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 CRYGBP07316 175 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 CRYGAP11844 174 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 EFNA4P52798 201 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 WT1-ASQ06250 92 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 PMVKQ15126 192 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 PLGLAQ15195 96 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 DEFB133Q30KQ1 61 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 PVRIGQ6DKI7 326 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 ASCL5Q7RTU5 278 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 DTX2Q86UW9 622 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 SLC25A29Q8N8R3 303 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 NEXN-AS1Q8NBZ9 246 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 MBD3L2Q8NHZ7 208 aaPredicted RBP3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 TMEM167AQ8TBQ9 72 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 PLEKHB2Q96CS7 222 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 DUX3Q96PT4 197 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 SCNM1Q9BWG6 230 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 EDA2RQ9HAV5 297 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 MRPL36Q9P0J6 103 aaKnown RBP3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 PCNX2A6NKB5 2137 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 F5P12259 2224 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 EP300Q09472 2414 aaPredicted RBP3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 FAM236AA0A1B0GUQ0 79 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 FAM236BA0A1B0GV22 79 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 H3BT86 120 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 IGLV3-19P01714 112 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 COX7CP15954 63 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 C17orf58Q2M2W7 97 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 C2orf82Q6UX34 121 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 SIGLEC15Q6ZMC9 328 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 MDP1Q86V88 176 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 KIR2DL5BQ8NHK3 375 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 IGFBPL1Q8WX77 278 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 IMMP1LQ96LU5 166 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 DOCK7Q96N67 2140 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 C8orf49Q96NF6 230 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 SCGB3A1Q96QR1 104 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 FAM30AQ9NZY2 134 aa3.68□□□□□ -1.82
SNRNP40-206ENST00000489853 FAM186AA6NE01 2351 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 SDK2Q58EX2 2172 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 WDFY3Q8IZQ1 3526 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 A0A0B4J2C4 111 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 TRBV30A0A0K0K1B3 111 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 SCRG1O75711 98 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 GAS8-AS1O95177 125 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 IGHV3-48P01763 117 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 TRACP01848 142 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 ORM1P02763 201 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 CRYGDP07320 174 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 EGR2P11161 476 aaPredicted RBP3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 CXCL5P42830 114 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 HERVK_113P61574 105 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 MZT1Q08AG7 82 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 TMEM30BQ3MIR4 351 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 PAPPA-AS1Q5QFB9 102 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 TMEM263Q8WUH6 116 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 TOMM6Q96B49 74 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 DPH3Q96FX2 82 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 ASCL2Q99929 193 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 MSRB1Q9NZV6 116 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 FREM1Q5H8C1 2179 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 USP24Q9UPU5 2620 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 CHD8Q9HCK8 2581 aa3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 INTS1Q8N201 2190 aaKnown RBP3.67□□□□□ -1.82
SNRNP40-206ENST00000489853 ZZEF1O43149 2961 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 IGKV1D-17A0A075B6S4 117 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 TRAV17A0A0B4J275 112 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 CGB1A6NKQ9 187 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 E7EUB6 86 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 ELANEP08246 267 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 RFPL3SP0C7P2 107 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 GATA1P15976 413 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 DLX6P56179 175 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 ORMDL2Q53FV1 153 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 LINC00643Q86TS7 51 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 NRACQ8N912 160 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 LEAP2Q969E1 77 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 SHANK2-AS3Q9BTD1 123 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 LINC00574Q9H8X3 128 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 ZNF256Q9Y2P7 627 aaPredicted RBP3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 SPEGQ15772 3267 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 CEP250Q9BV73 2442 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 CACNA1BQ00975 2339 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 TMEM258P61165 79 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 LYZP61626 148 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 ERCC8Q13216 396 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 PDE6HQ13956 83 aa3.66□□□□□ -1.82
SNRNP40-206ENST00000489853 ZNF672Q499Z4 452 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms