RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 H3BNG1 76 aa13.34□□□□□ -0.27
EPHB4-207ENST00000489808 LGALSLQ3ZCW2 172 aaPredicted RBP13.34□□□□□ -0.27
EPHB4-207ENST00000489808 FAM213BQ8TBF2 198 aa13.34□□□□□ -0.27
EPHB4-207ENST00000489808 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
EPHB4-207ENST00000489808 HIST1H2BAQ96A08 127 aa13.34□□□□□ -0.27
EPHB4-207ENST00000489808 BIRC6Q9NR09 4857 aa13.34□□□□□ -0.27
EPHB4-207ENST00000489808 IGHV3-16A0A0C4DH30 117 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 PEX7O00628 323 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 GCGP01275 180 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 TPT1P13693 172 aaKnown RBP13.33□□□□□ -0.28
EPHB4-207ENST00000489808 FAM3BP58499 235 aaPredicted RBP13.33□□□□□ -0.28
EPHB4-207ENST00000489808 SMUG1Q53HV7 270 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 DPPA3Q6W0C5 159 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 RASL10AQ92737 203 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 KCNS1Q96KK3 526 aa13.33□□□□□ -0.28
EPHB4-207ENST00000489808 FRAS1Q86XX4 4008 aa13.32□□□□□ -0.28
EPHB4-207ENST00000489808 PPT1P50897 306 aa13.32□□□□□ -0.28
EPHB4-207ENST00000489808 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
EPHB4-207ENST00000489808 SDF2L1Q9HCN8 221 aa13.32□□□□□ -0.28
EPHB4-207ENST00000489808 C11orf21Q9P2W6 132 aa13.32□□□□□ -0.28
EPHB4-207ENST00000489808 M0R2N4 97 aa13.31□□□□□ -0.28
EPHB4-207ENST00000489808 IGHV3-53P01767 116 aa13.31□□□□□ -0.28
EPHB4-207ENST00000489808 TYMSP04818 313 aa13.31□□□□□ -0.28
EPHB4-207ENST00000489808 PFN1P07737 140 aaKnown RBP13.31□□□□□ -0.28
EPHB4-207ENST00000489808 CCL18P55774 89 aa13.31□□□□□ -0.28
EPHB4-207ENST00000489808 CST9LP1Q5W188 147 aa13.31□□□□□ -0.28
EPHB4-207ENST00000489808 C1QBP02746 253 aa13.3□□□□□ -0.28
EPHB4-207ENST00000489808 H2AFB1P0C5Y9 115 aa13.3□□□□□ -0.28
EPHB4-207ENST00000489808 ZFP69Q49AA0 526 aa13.3□□□□□ -0.28
EPHB4-207ENST00000489808 LINC00588Q9Y4M8 146 aa13.3□□□□□ -0.28
EPHB4-207ENST00000489808 ARL2-SNX15V9GYD0 113 aa13.3□□□□□ -0.28
EPHB4-207ENST00000489808 IGLV2-18A0A075B6J9 118 aa13.29□□□□□ -0.28
EPHB4-207ENST00000489808 M0R2P5 195 aa13.29□□□□□ -0.28
EPHB4-207ENST00000489808 PAGE4O60829 102 aa13.29□□□□□ -0.28
EPHB4-207ENST00000489808 SLAQ13239 276 aa13.29□□□□□ -0.28
EPHB4-207ENST00000489808 FHL2Q14192 279 aa13.29□□□□□ -0.28
EPHB4-207ENST00000489808 TCEAL7Q9BRU2 100 aa13.29□□□□□ -0.28
EPHB4-207ENST00000489808 DNAH17Q9UFH2 4485 aa13.28□□□□□ -0.28
EPHB4-207ENST00000489808 A0A1B0GV50 99 aa13.28□□□□□ -0.28
EPHB4-207ENST00000489808 Q6ZR54 194 aa13.28□□□□□ -0.28
EPHB4-207ENST00000489808 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
EPHB4-207ENST00000489808 HHLA3Q9XRX5 114 aa13.28□□□□□ -0.28
EPHB4-207ENST00000489808 FABP5P3A8MUU1 101 aa13.27□□□□□ -0.29
EPHB4-207ENST00000489808 PAX4O43316 350 aa13.27□□□□□ -0.29
EPHB4-207ENST00000489808 EIF5AL1Q6IS14 154 aaKnown RBP13.27□□□□□ -0.29
EPHB4-207ENST00000489808 Q86TA4 180 aa13.27□□□□□ -0.29
EPHB4-207ENST00000489808 ZNRF2Q8NHG8 242 aa13.27□□□□□ -0.29
EPHB4-207ENST00000489808 ZNF479Q96JC4 524 aa13.27□□□□□ -0.29
EPHB4-207ENST00000489808 ZFP30Q9Y2G7 519 aa13.27□□□□□ -0.29
EPHB4-207ENST00000489808 hCG_2014768A0A024R1R8 64 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 A0A096LPF7 62 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 RAB5CP51148 216 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 CRYBA4P53673 196 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 ESRGQ1W209 222 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 COX8CQ7Z4L0 72 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 AKAP14Q86UN6 197 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 FMC1Q96HJ9 113 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 FAT2Q9NYQ8 4349 aa13.26□□□□□ -0.29
EPHB4-207ENST00000489808 TRBV6-1A0A0K0K1D8 114 aa13.25□□□□□ -0.29
EPHB4-207ENST00000489808 SFTA3P0C7M3 94 aa13.25□□□□□ -0.29
EPHB4-207ENST00000489808 CRIP1P50238 77 aa13.25□□□□□ -0.29
EPHB4-207ENST00000489808 MUC4Q99102 2169 aa13.25□□□□□ -0.29
EPHB4-207ENST00000489808 TRAV4A0A0B4J268 109 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 TRGV4A0A0C4DH28 118 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 UBE2G1P62253 170 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 CCL20P78556 96 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 SLC51BQ86UW2 128 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 OR4C5Q8NGB2 326 aa13.24□□□□□ -0.29
EPHB4-207ENST00000489808 TRAV1-1A0A0B4J248 108 aa13.23□□□□□ -0.29
EPHB4-207ENST00000489808 AKR1C3P42330 323 aa13.23□□□□□ -0.29
EPHB4-207ENST00000489808 SULT1A2P50226 295 aa13.23□□□□□ -0.29
EPHB4-207ENST00000489808 ZC2HC1AQ96GY0 325 aa13.23□□□□□ -0.29
EPHB4-207ENST00000489808 C9orf85Q96MD7 179 aa13.23□□□□□ -0.29
EPHB4-207ENST00000489808 C9JCJ5 164 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 LTAP01374 205 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 RNASE3P12724 160 aaKnown RBP13.22□□□□□ -0.29
EPHB4-207ENST00000489808 ZNF876PQ49A33 203 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 LINC00336Q6ZUF6 198 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 PTH2Q96A98 100 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 Q9H8V8 135 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 ICOSQ9Y6W8 199 aa13.22□□□□□ -0.29
EPHB4-207ENST00000489808 RTL8CO15255 209 aa13.21□□□□□ -0.29
EPHB4-207ENST00000489808 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
EPHB4-207ENST00000489808 UPK3BQ9BT76 320 aa13.21□□□□□ -0.29
EPHB4-207ENST00000489808 NBDYA0A0U1RRE5 68 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 SCO2A0A1W2PP80 73 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 ORM1P02763 201 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 MRPL23Q16540 153 aaKnown RBP13.2□□□□□ -0.3
EPHB4-207ENST00000489808 ZNF674Q2M3X9 581 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 FAM162BQ5T6X4 162 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 C9orf62Q8N4C0 152 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
EPHB4-207ENST00000489808 NACAE9PAV3 2078 aa13.2□□□□□ -0.3
EPHB4-207ENST00000489808 PGPEP1LA6NFU8 196 aa13.19□□□□□ -0.3
EPHB4-207ENST00000489808 B4DEV8 164 aa13.19□□□□□ -0.3
EPHB4-207ENST00000489808 KRBOX1C9JBD0 128 aa13.19□□□□□ -0.3
EPHB4-207ENST00000489808 TEX46H3BTG2 121 aa13.19□□□□□ -0.3
EPHB4-207ENST00000489808 RS1O15537 224 aa13.19□□□□□ -0.3
EPHB4-207ENST00000489808 SH2D1AO60880 128 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms