RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 SRIP30626 198 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 ASIPP42127 132 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 HILS1P60008 231 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 JOSD1Q15040 202 aaPredicted RBP4.82□□□□□ -1.64
SF3A3-208ENST00000489537 PSMG4Q5JS54 123 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 FOXI2Q6ZQN5 318 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 APRG1Q8IVJ8 170 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 ORMDL3Q8N138 153 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 OR2K2Q8NGT1 345 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 GTSF1Q8WW33 167 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 VGLL1Q99990 258 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 ALKBH7Q9BT30 221 aaPredicted RBP4.82□□□□□ -1.64
SF3A3-208ENST00000489537 TMEM191AQ9H0A3 160 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 NIT2Q9NQR4 276 aa4.82□□□□□ -1.64
SF3A3-208ENST00000489537 TSSC4Q9Y5U2 329 aaPredicted RBP4.82□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV3OR16-13A0A075B7E8 117 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV3OR16-8A0A075B7F1 116 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV3-74A0A0B4J1X5 117 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV3-66A0A0C4DH42 116 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 C2orf70A6NJV1 201 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 ZNF705FA8MVS1 300 aaPredicted RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 K7EMI3 77 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 K7EQG2 157 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 ZNF207O43670 478 aaKnown RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 SPINK4O60575 86 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 ZNF324O75467 553 aaPredicted RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 TRBV12-3P01733 135 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 APOHP02749 345 aaPredicted RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 IGLC6P0CF74 106 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 S100A4P26447 101 aaKnown RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 AMTP48728 403 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 SYNJ2BPP57105 145 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 LYZL1Q6UWQ5 148 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 LINC00322Q6ZN03 302 aaPredicted RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 DYNLRB2Q8TF09 96 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 DCANP1Q8TF63 244 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 C8orf49Q96NF6 230 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 CLUHP3Q96NS8 147 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 SPAG8Q99932 426 aaPredicted RBP4.81□□□□□ -1.64
SF3A3-208ENST00000489537 C20orf144Q9BQM9 153 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 AP5S1Q9NUS5 200 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 HSPB8Q9UJY1 196 aa4.81□□□□□ -1.64
SF3A3-208ENST00000489537 CMYA5Q8N3K9 4069 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV4OR15-8A0A075B7B6 117 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 A0A087WW49 117 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 IGHV3-49A0A0A0MS15 119 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 SNAI2O43623 268 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 SERF1AO75920 110 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 LINC00614P0C842 121 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 CRIP1P50238 77 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 SLAQ13239 276 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 TWIST1Q15672 202 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 PMCHL1Q16048 86 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 TMEM95Q3KNT9 176 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 KRTAP24-1Q3LI83 254 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 TCTEX1D4Q5JR98 221 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 KHDC1LQ5JSQ8 128 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 FAM104BQ5XKR9 115 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 FAM159AQ6UWV7 190 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 Q6ZSV7 163 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 FA2HQ7L5A8 372 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 RNF182Q8N6D2 247 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 KLHL30-AS1Q8NEE0 82 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 OR11H1Q8NG94 326 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 OR9G4Q8NGQ1 327 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 C18orf32Q8TCD1 76 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 MRAP2Q96G30 205 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 FAM19A4Q96LR4 140 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 FAM110AQ9BQ89 295 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 TPPP3Q9BW30 176 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 MS4A6AQ9H2W1 248 aa4.8□□□□□ -1.64
SF3A3-208ENST00000489537 NXT2Q9NPJ8 142 aaKnown RBP4.8□□□□□ -1.64
SF3A3-208ENST00000489537 TRGV11A0A075B6L2 103 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 A0A0J9YX75 114 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 GRIFINA4D1Z8 144 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 KLLNB2CW77 178 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 TCAPO15273 167 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 TCF21O43680 179 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 ARMS2P0C7Q2 107 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 CKS2P33552 79 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 CDKN1BP46527 198 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 PKIAP61925 76 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 NUTF2P61970 127 aaKnown RBP4.79□□□□□ -1.64
SF3A3-208ENST00000489537 ERCC8Q13216 396 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 PDZD11Q5EBL8 140 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 PIK3CD-AS1Q5SR53 167 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 SYT8Q8NBV8 401 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 PRSS3P2Q8NHM4 247 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 Q8TAT8 98 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 NDUFAF3Q9BU61 184 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 NAGKQ9UJ70 344 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 U3KQK5 164 aa4.79□□□□□ -1.64
SF3A3-208ENST00000489537 C7orf71A4D174 169 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 M0R2Z0 102 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 SCGB1D1O95968 90 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
SF3A3-208ENST00000489537 NTF3P20783 257 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms