RNA–Protein interactions for RNA: ENST00000489247.1

ATG4A-208, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-208ENST00000489247 TMEM78Q5T7P6 136 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 C10orf99Q6UWK7 81 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 IL17RELQ6ZVW7 336 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 TMEM256Q8N2U0 113 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 RNF182Q8N6D2 247 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 C18orf32Q8TCD1 76 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 C4orf3Q8WVX3 66 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 PGLYRP4Q96LB8 373 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 U3KQK5 164 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 CENPEQ02224 2701 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 CELSR2Q9HCU4 2923 aa4.16□□□□□ -1.74
ATG4A-208ENST00000489247 TENM4Q6N022 2769 aa4.15□□□□□ -1.74
ATG4A-208ENST00000489247 ZFHX3Q15911 3703 aa4.15□□□□□ -1.74
ATG4A-208ENST00000489247 IGHV3OR16-13A0A075B7E8 117 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 LOC102724200A0A096LPH7 203 aaPredicted RBP4.15□□□□□ -1.75
ATG4A-208ENST00000489247 IGHV3-49A0A0A0MS15 119 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 IGHV3-74A0A0B4J1X5 117 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 DNAJC9-AS1A6NH13 148 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 A8MTW9 85 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 F2Z2F3 143 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 SNAI2O43623 268 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 NUPR1O60356 82 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 SPINK4O60575 86 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 SERF1AO75920 110 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 ARMS2P0C7Q2 107 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 SRIP30626 198 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 ID1P41134 155 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 RAB4BP61018 213 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 ERCC8Q13216 396 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 TCTEX1D4Q5JR98 221 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 HIST2H2BCQ6DN03 193 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 Q6ZSV7 163 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 ZFAND2AQ8N6M9 145 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 OR8A1Q8NGG7 326 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 Q8TAT8 98 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 KCNS1Q96KK3 526 aa4.15□□□□□ -1.75
ATG4A-208ENST00000489247 UTP20O75691 2785 aaKnown RBP4.15□□□□□ -1.75
ATG4A-208ENST00000489247 CRYBG3Q68DQ2 2970 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 IGHV4OR15-8A0A075B7B6 117 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 A0A087WW49 117 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 A0A1B0GUS0 222 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 GRIFINA4D1Z8 144 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 C2orf70A6NJV1 201 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 KLLNB2CW77 178 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 K7EQG2 157 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 ZNF324O75467 553 aaPredicted RBP4.14□□□□□ -1.75
ATG4A-208ENST00000489247 NDUFA7O95182 113 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 GPX1P07203 203 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 OR5AL1P0C617 328 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 GZMBP10144 247 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 HOXD3P31249 432 aaPredicted RBP4.14□□□□□ -1.75
ATG4A-208ENST00000489247 CAMPP49913 170 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 PDZD11Q5EBL8 140 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 FAM104BQ5XKR9 115 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 LYZL1Q6UWQ5 148 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 BAGE3Q86Y29 109 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 DEFB125Q8N687 156 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 KLHDC1Q8N7A1 406 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 FER1L6-AS1Q8NA97 138 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 OR10J6PQ8NGY7 276 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 DPF1Q92782 380 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 CHCHD1Q96BP2 118 aaKnown RBP4.14□□□□□ -1.75
ATG4A-208ENST00000489247 TMEM191AQ9H0A3 160 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 ESM1Q9NQ30 184 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 NIT2Q9NQR4 276 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 SIGLEC8Q9NYZ4 499 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 PDZD2O15018 2839 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 ITPR3Q14573 2671 aa4.14□□□□□ -1.75
ATG4A-208ENST00000489247 ZANQ9Y493 2812 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 DOPEY2Q9Y3R5 2298 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 TRAV21A0A0B4J279 112 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 LINC01546A6NGU7 62 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 LINC01619G3V211 115 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 NXPH4O95158 308 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 RAB4AP20338 218 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 PMCHP20382 165 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 HILS1P60008 231 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 IQCJQ1A5X6 159 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 KIAA1644Q3SXP7 199 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 ADAMTSL5Q6ZMM2 481 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 NIT1Q86X76 327 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 ZNF738Q8NE65 137 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 BORCS7Q96B45 105 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 URB1-AS1Q96HZ7 61 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 RCHY1Q96PM5 261 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 MS4A6AQ9H2W1 248 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 SCRT2Q9NQ03 307 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 GSN-AS1Q9NRJ2 163 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 LAMTOR2Q9Y2Q5 125 aa4.13□□□□□ -1.75
ATG4A-208ENST00000489247 CCDC168Q8NDH2 2452 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 A0A0J9YX75 114 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 PRSS47A8MTI9 375 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 M0QZ24 198 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 ORM1P02763 201 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 PPBPP02775 128 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 EDN2P20800 178 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 SYNJ2BPP57105 145 aa4.12□□□□□ -1.75
ATG4A-208ENST00000489247 SNRPD3P62318 126 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms