RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 ATP5L2Q7Z4Y8 100 aa7.39□□□□□ -1.23
USP11-211ENST00000489111 KCNS1Q96KK3 526 aa7.39□□□□□ -1.23
USP11-211ENST00000489111 WFDC10AQ9H1F0 79 aa7.39□□□□□ -1.23
USP11-211ENST00000489111 SRD5A3Q9H8P0 318 aa7.39□□□□□ -1.23
USP11-211ENST00000489111 C11orf21Q9P2W6 132 aa7.39□□□□□ -1.23
USP11-211ENST00000489111 IGKV3D-20A0A0C4DH25 116 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 A0A1B0GUT8 65 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 C1orf196B1AJZ1 125 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 S100A8P05109 93 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 S100A4P26447 101 aaKnown RBP7.38□□□□□ -1.23
USP11-211ENST00000489111 CTRLP40313 264 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 HBBP68871 147 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 RIGQ13278 110 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 ANXA2RQ3ZCQ2 193 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 WDR73Q6P4I2 378 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 RASL11AQ6T310 242 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 Q6ZQT7 251 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
USP11-211ENST00000489111 ZMAT5Q9UDW3 170 aaKnown RBP7.38□□□□□ -1.23
USP11-211ENST00000489111 IGHV1OR15-1A0A075B7D0 117 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 A0A1B0GW15 77 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 F2Z2F3 143 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 MT-ND6P03923 174 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 RPL35AP18077 110 aaKnown RBP7.37□□□□□ -1.23
USP11-211ENST00000489111 CAMPP49913 170 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
USP11-211ENST00000489111 RAB5BP61020 215 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 MORN3Q6PF18 240 aaPredicted RBP7.37□□□□□ -1.23
USP11-211ENST00000489111 LYZL1Q6UWQ5 148 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 DEFB125Q8N687 156 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 FRZBQ92765 325 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 C20orf144Q9BQM9 153 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 TMEM208Q9BTX3 173 aa7.37□□□□□ -1.23
USP11-211ENST00000489111 TIMM8BQ9Y5J9 83 aaPredicted RBP7.37□□□□□ -1.23
USP11-211ENST00000489111 TRGV11A0A075B6L2 103 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 SNURFLB1AK76 121 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 H3BVH4 76 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 ZNF324O75467 553 aaPredicted RBP7.36□□□□□ -1.23
USP11-211ENST00000489111 HLA-DQA1P01909 254 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 ARMS2P0C7Q2 107 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 C1QTNF4Q9BXJ3 329 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 GNB1LQ9BYB4 327 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 TRAPPC1Q9Y5R8 145 aa7.36□□□□□ -1.23
USP11-211ENST00000489111 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 A0A1B0GXF2 115 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 CBY3A6NI87 242 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 CRXO43186 299 aaPredicted RBP7.35□□□□□ -1.23
USP11-211ENST00000489111 TRGC2P03986 189 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 OR5AL1P0C617 328 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 MED14OSP0DP75 135 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 SSTP61278 116 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 CACNG7P62955 275 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 TDRG1Q3Y452 100 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 OXLD1Q5BKU9 147 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 TMEM256Q8N2U0 113 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 LINC01587Q99440 93 aa7.35□□□□□ -1.23
USP11-211ENST00000489111 GNRH2O43555 120 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 SNAI2O43623 268 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 RBMY1A1P0DJD3 496 aaKnown RBP7.34□□□□□ -1.23
USP11-211ENST00000489111 RBMY1CP0DJD4 496 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 HTN1P15515 57 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 FABP9Q0Z7S8 132 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 RBMY1FQ15415 496 aaKnown RBP7.34□□□□□ -1.23
USP11-211ENST00000489111 TWIST1Q15672 202 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 TMEM136Q6ZRR5 245 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 SMIM15Q7Z3B0 74 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 LURAP1LQ8IV03 231 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 MDFIQ99750 246 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 MRPL18Q9H0U6 180 aaKnown RBP7.34□□□□□ -1.23
USP11-211ENST00000489111 GOLT1BQ9Y3E0 138 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 PHLDA3Q9Y5J5 127 aa7.34□□□□□ -1.23
USP11-211ENST00000489111 VWFP04275 2813 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 IGHV3OR16-12A0A075B7B8 117 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 IGHV3-16A0A0C4DH30 117 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 APCSP02743 223 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 FRMD6-AS1P0C7T7 363 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 DNLZQ5SXM8 178 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 ZFP82Q8N141 532 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 Q8N1Y9 231 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 OR10AG1Q8NH19 301 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 LINC00467Q9BRT7 94 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 CNFNQ9BYD5 112 aa7.33□□□□□ -1.24
USP11-211ENST00000489111 COL6A5A8TX70 2615 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 LOC102724200A0A096LPH7 203 aaPredicted RBP7.32□□□□□ -1.24
USP11-211ENST00000489111 M0R381 172 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 NTF3P20783 257 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 APOC4P55056 127 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 RIPPLY3P57055 190 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 ZNF415Q09FC8 603 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 EGFEM1PQ0D2K5 195 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 ZNF575Q86XF7 245 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 SYT8Q8NBV8 401 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 SSBP4Q9BWG4 385 aaPredicted RBP7.32□□□□□ -1.24
USP11-211ENST00000489111 CSTL1Q9H114 145 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 TP53TG3Q9ULZ0 132 aa7.32□□□□□ -1.24
USP11-211ENST00000489111 STAB1Q9NY15 2570 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms