RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TDRG1Q3Y452 100 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 CST9LP1Q5W188 147 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 Q6ZNX1 250 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 TCTE3Q8IZS6 198 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 SFT2D1Q8WV19 159 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 MDFICQ9P1T7 246 aa10.01□□□□□ -0.81
BRCA1-218ENST00000489037 H3BNG1 76 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 HOXA5P20719 270 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 FHITP49789 147 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 SLAQ13239 276 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 C8orf49Q96NF6 230 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 ARL2-SNX15V9GYD0 113 aa10□□□□□ -0.81
BRCA1-218ENST00000489037 TRAV34A0A0B4J273 112 aa9.99□□□□□ -0.81
BRCA1-218ENST00000489037 GNRH2O43555 120 aa9.99□□□□□ -0.81
BRCA1-218ENST00000489037 IGLV2-11P01706 119 aa9.99□□□□□ -0.81
BRCA1-218ENST00000489037 PFN1P07737 140 aaKnown RBP9.99□□□□□ -0.81
BRCA1-218ENST00000489037 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
BRCA1-218ENST00000489037 UBE2G1P62253 170 aa9.99□□□□□ -0.81
BRCA1-218ENST00000489037 LGALSLQ3ZCW2 172 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-218ENST00000489037 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 IGHV3-16A0A0C4DH30 117 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 M0R2N4 97 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 M0R2P5 195 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 IGHV3-53P01767 116 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 C1QBP02746 253 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 TYMSP04818 313 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 AKAP14Q86UN6 197 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 LINC00479Q96M42 142 aa9.98□□□□□ -0.81
BRCA1-218ENST00000489037 hCG_2014768A0A024R1R8 64 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 IGLV2-18A0A075B6J9 118 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 A0A1B0GV50 99 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 FABP5P3A8MUU1 101 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 TEX46H3BTG2 121 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 PAX4O43316 350 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 PAGE4O60829 102 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 RAB5CP51148 216 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
BRCA1-218ENST00000489037 RASL10AQ92737 203 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 FMC1Q96HJ9 113 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 PRO0255Q9UI72 69 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 ZFP30Q9Y2G7 519 aa9.97□□□□□ -0.81
BRCA1-218ENST00000489037 AKR1C3P42330 323 aa9.96□□□□□ -0.82
BRCA1-218ENST00000489037 Q86TA4 180 aa9.96□□□□□ -0.82
BRCA1-218ENST00000489037 HHLA3Q9XRX5 114 aa9.96□□□□□ -0.82
BRCA1-218ENST00000489037 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
BRCA1-218ENST00000489037 S100A4P26447 101 aaKnown RBP9.95□□□□□ -0.82
BRCA1-218ENST00000489037 SOHLH1Q5JUK2 328 aa9.95□□□□□ -0.82
BRCA1-218ENST00000489037 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
BRCA1-218ENST00000489037 OR4C5Q8NGB2 326 aa9.95□□□□□ -0.82
BRCA1-218ENST00000489037 ICOSQ9Y6W8 199 aa9.95□□□□□ -0.82
BRCA1-218ENST00000489037 TRAV4A0A0B4J268 109 aa9.94□□□□□ -0.82
BRCA1-218ENST00000489037 LINC00336Q6ZUF6 198 aa9.94□□□□□ -0.82
BRCA1-218ENST00000489037 VSIG2Q96IQ7 327 aa9.94□□□□□ -0.82
BRCA1-218ENST00000489037 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
BRCA1-218ENST00000489037 TRBV6-1A0A0K0K1D8 114 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 C9JCJ5 164 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 ORM1P02763 201 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 SFTA3P0C7M3 94 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 CRYBA4P53673 196 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 FHL2Q14192 279 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
BRCA1-218ENST00000489037 ZNF876PQ49A33 203 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 PCNPQ8WW12 178 aaKnown RBP9.93□□□□□ -0.82
BRCA1-218ENST00000489037 MANBALQ9NQG1 85 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
BRCA1-218ENST00000489037 A0A096LPF7 62 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 CIDEAO60543 219 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 ASIPP42127 132 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 SULT1A2P50226 295 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 FAM162BQ5T6X4 162 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 ZNRF2Q8NHG8 242 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 ZNF479Q96JC4 524 aa9.92□□□□□ -0.82
BRCA1-218ENST00000489037 EPPK1P58107 5090 aaKnown RBP9.91□□□□□ -0.82
BRCA1-218ENST00000489037 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 B4DEV8 164 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 ESRGQ1W209 222 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 Q9H8V8 135 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 GNG13Q9P2W3 67 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 DNAH10Q8IVF4 4471 aa9.91□□□□□ -0.82
BRCA1-218ENST00000489037 NBDYA0A0U1RRE5 68 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 LTAP01374 205 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 IFNA1P01562 189 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 SRIP30626 198 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 C1orf134Q5TEV5 83 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 Q6ZR54 194 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 COX8CQ7Z4L0 72 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 PTH2Q96A98 100 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 C9orf85Q96MD7 179 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 TXNDC17Q9BRA2 123 aa9.9□□□□□ -0.82
BRCA1-218ENST00000489037 MRPS16Q9Y3D3 137 aaKnown RBP9.9□□□□□ -0.82
BRCA1-218ENST00000489037 IGKV3D-20A0A0C4DH25 116 aa9.89□□□□□ -0.83
BRCA1-218ENST00000489037 SCO2A0A1W2PP80 73 aa9.89□□□□□ -0.83
BRCA1-218ENST00000489037 SH2D1AO60880 128 aa9.89□□□□□ -0.83
BRCA1-218ENST00000489037 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
BRCA1-218ENST00000489037 NEGR1Q7Z3B1 354 aa9.89□□□□□ -0.83
BRCA1-218ENST00000489037 BAGE2Q86Y30 109 aa9.89□□□□□ -0.83
BRCA1-218ENST00000489037 UPK3BQ9BT76 320 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 177.9 ms