RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TRAV21A0A0B4J279 112 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 F6UZH7 168 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 TYMSP04818 313 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 PET100P0DJ07 73 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 GCSHP23434 173 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 FAM74A1Q5RGS3 127 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 SH2D6Q7Z4S9 175 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 NHLRC2Q8NBF2 726 aa12.41□□□□□ -0.42
HDAC6-231ENST00000488905 PGPA6NDG6 321 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 GNRH2O43555 120 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 UPK1BO75841 260 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 MPC2O95563 127 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 GATA1P15976 413 aaPredicted RBP12.4□□□□□ -0.42
HDAC6-231ENST00000488905 TIRAPP58753 221 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 GOLT1AQ6ZVE7 132 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 SCGB1C1Q8TD33 95 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
HDAC6-231ENST00000488905 INMT-MINDY4F8WBC2 141 aa12.39□□□□□ -0.43
HDAC6-231ENST00000488905 PPT1P50897 306 aa12.39□□□□□ -0.43
HDAC6-231ENST00000488905 SDF2L1Q9HCN8 221 aa12.39□□□□□ -0.43
HDAC6-231ENST00000488905 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
HDAC6-231ENST00000488905 TRAV8-1A0A0A6YYK1 113 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 IGHV3-38A0A0C4DH36 116 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 RPL12P30050 165 aaKnown RBP12.38□□□□□ -0.43
HDAC6-231ENST00000488905 LINC01556Q5JQF7 62 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 PQLC2Q6ZP29 291 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 ARL6IP6Q8N6S5 226 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
HDAC6-231ENST00000488905 PSCAO43653 123 aa12.37□□□□□ -0.43
HDAC6-231ENST00000488905 ACOT6Q3I5F7 207 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-231ENST00000488905 KCNS1Q96KK3 526 aa12.37□□□□□ -0.43
HDAC6-231ENST00000488905 IGLV5-52A0A0A0MRZ9 124 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 LRCOL1A6NCL2 159 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
HDAC6-231ENST00000488905 SMR3BP02814 79 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-231ENST00000488905 RAB2AP61019 212 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 GNG5P63218 68 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 IFITM3Q01628 133 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-231ENST00000488905 ASB13Q8WXK3 278 aa12.36□□□□□ -0.43
HDAC6-231ENST00000488905 SSNA1O43805 119 aa12.35□□□□□ -0.43
HDAC6-231ENST00000488905 HAMPP81172 84 aa12.35□□□□□ -0.43
HDAC6-231ENST00000488905 SLC25A29Q8N8R3 303 aa12.35□□□□□ -0.43
HDAC6-231ENST00000488905 MARVELD1Q9BSK0 173 aa12.35□□□□□ -0.43
HDAC6-231ENST00000488905 WFDC1Q9HC57 220 aa12.35□□□□□ -0.43
HDAC6-231ENST00000488905 IBA57-AS1B1ANH7 110 aa12.34□□□□□ -0.43
HDAC6-231ENST00000488905 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
HDAC6-231ENST00000488905 NDFIP1Q9BT67 221 aa12.34□□□□□ -0.43
HDAC6-231ENST00000488905 TMEM70Q9BUB7 260 aa12.34□□□□□ -0.43
HDAC6-231ENST00000488905 Q9HAA7 133 aa12.34□□□□□ -0.43
HDAC6-231ENST00000488905 TRAV8-6A0A0B4J262 113 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
HDAC6-231ENST00000488905 PFN1P07737 140 aaKnown RBP12.33□□□□□ -0.44
HDAC6-231ENST00000488905 RHOHQ15669 191 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 OR10J3Q5JRS4 329 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 SGK494Q96LW2 274 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 PRADC1Q9BSG0 188 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
HDAC6-231ENST00000488905 SERTM2A0A1B0GWG4 89 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 RS1O15537 224 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 CIDEAO60543 219 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 ARL14EPLP0DKL9 152 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 DPPA3Q6W0C5 159 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 Q8N814 137 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 OR10G9Q8NGN4 311 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 OR10G7Q8NGN6 311 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 C11orf21Q9P2W6 132 aa12.32□□□□□ -0.44
HDAC6-231ENST00000488905 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
HDAC6-231ENST00000488905 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
HDAC6-231ENST00000488905 CDC34P49427 236 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-231ENST00000488905 ZNF80P51504 273 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-231ENST00000488905 LELP1Q5T871 98 aa12.31□□□□□ -0.44
HDAC6-231ENST00000488905 Q6ZSN1 163 aa12.31□□□□□ -0.44
HDAC6-231ENST00000488905 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
HDAC6-231ENST00000488905 IGHV3-73A0A0B4J1V6 119 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 IGHV3-33P01772 117 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 TCRAP04437 139 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 IGHV3-30-3P0DP02 117 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
HDAC6-231ENST00000488905 TAAR5O14804 337 aa12.29□□□□□ -0.44
HDAC6-231ENST00000488905 GCGP01275 180 aa12.29□□□□□ -0.44
HDAC6-231ENST00000488905 STAG3L2P0CL84 134 aa12.29□□□□□ -0.44
HDAC6-231ENST00000488905 STAG3L3P0CL85 134 aa12.29□□□□□ -0.44
HDAC6-231ENST00000488905 LAGE3Q14657 143 aa12.29□□□□□ -0.44
HDAC6-231ENST00000488905 ZNF506Q5JVG8 444 aa12.29□□□□□ -0.44
HDAC6-231ENST00000488905 K7EQM0 130 aa12.28□□□□□ -0.44
HDAC6-231ENST00000488905 MGST1P10620 155 aaKnown RBP12.28□□□□□ -0.44
HDAC6-231ENST00000488905 ZFP69Q49AA0 526 aa12.28□□□□□ -0.44
HDAC6-231ENST00000488905 OR2G3Q8NGZ4 309 aa12.28□□□□□ -0.44
HDAC6-231ENST00000488905 GTSF1LQ9H1H1 148 aa12.28□□□□□ -0.44
HDAC6-231ENST00000488905 PSG8Q9UQ74 426 aa12.28□□□□□ -0.44
HDAC6-231ENST00000488905 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
HDAC6-231ENST00000488905 DEFA1P59665 94 aa12.27□□□□□ -0.45
HDAC6-231ENST00000488905 DEFA3P59666 94 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms