RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 RPL19P84098 196 aaKnown RBP8.91□□□□□ -0.98
TRAIP-209ENST00000488860 SDF2L1Q9HCN8 221 aa8.91□□□□□ -0.98
TRAIP-209ENST00000488860 TP53TG3Q9ULZ0 132 aa8.91□□□□□ -0.98
TRAIP-209ENST00000488860 TRGV11A0A075B6L2 103 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 IGHV4-28A0A0C4DH34 117 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 DEFB4AO15263 64 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 P01737 135 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 TYMSP04818 313 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 MIFP14174 115 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 AZU1P20160 251 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 EMP1P54849 157 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 ERVFC1-1P60608 527 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 IBA57Q5T440 356 aaKnown RBP8.9□□□□□ -0.98
TRAIP-209ENST00000488860 C16orf74Q96GX8 76 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
TRAIP-209ENST00000488860 TIMM8BQ9Y5J9 83 aaPredicted RBP8.9□□□□□ -0.98
TRAIP-209ENST00000488860 NBEAL2Q6ZNJ1 2754 aa8.9□□□□□ -0.99
TRAIP-209ENST00000488860 IGKV3D-20A0A0C4DH25 116 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 TMEM189A5PLL7 270 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 C19orf71A6NCJ1 209 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 SMIM9A6NGZ8 99 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 ZNF415Q09FC8 603 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 NUDT10Q8NFP7 164 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 OR2D3Q8NGH3 330 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 TMEM263Q8WUH6 116 aaKnown RBP8.89□□□□□ -0.99
TRAIP-209ENST00000488860 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 NUDT11Q96G61 164 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 NEU1Q99519 415 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 SEC11CQ9BY50 192 aa8.89□□□□□ -0.99
TRAIP-209ENST00000488860 GRIFINA4D1Z8 144 aa8.88□□□□□ -0.99
TRAIP-209ENST00000488860 KRBOX1C9JBD0 128 aa8.88□□□□□ -0.99
TRAIP-209ENST00000488860 GNRH2O43555 120 aa8.88□□□□□ -0.99
TRAIP-209ENST00000488860 GATCO43716 136 aaKnown RBP8.88□□□□□ -0.99
TRAIP-209ENST00000488860 NHLRC4P0CG21 123 aaPredicted RBP8.88□□□□□ -0.99
TRAIP-209ENST00000488860 S100A4P26447 101 aaKnown RBP8.88□□□□□ -0.99
TRAIP-209ENST00000488860 Q8NAQ8 132 aa8.88□□□□□ -0.99
TRAIP-209ENST00000488860 RNASE8Q8TDE3 154 aaKnown RBP8.88□□□□□ -0.99
TRAIP-209ENST00000488860 LINC00467Q9BRT7 94 aa8.88□□□□□ -0.99
TRAIP-209ENST00000488860 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
TRAIP-209ENST00000488860 FBN3Q75N90 2809 aa8.88□□□□□ -0.99
TRAIP-209ENST00000488860 SNURFLB1AK76 121 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 H3BVH4 76 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 GZMBP10144 247 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 ASIPP42127 132 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 PNRC1Q12796 327 aaPredicted RBP8.87□□□□□ -0.99
TRAIP-209ENST00000488860 TDRG1Q3Y452 100 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 C15orf54Q8N8G6 183 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 SFRP2Q96HF1 295 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 GSN-AS1Q9NRJ2 163 aa8.87□□□□□ -0.99
TRAIP-209ENST00000488860 COL7A1Q02388 2944 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 TENM3Q9P273 2699 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 IGHV3-16A0A0C4DH30 117 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 A0A0J9YWU9 116 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 FAM231DQ6ZW35 169 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 OR10G8Q8NGN5 311 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 TPPP3Q9BW30 176 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 MDFICQ9P1T7 246 aa8.86□□□□□ -0.99
TRAIP-209ENST00000488860 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 APOC3P02656 99 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 TCL1AP56279 114 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 RPS20P60866 119 aaKnown RBP8.85□□□□□ -0.99
TRAIP-209ENST00000488860 ZNF493Q6ZR52 646 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 C11orf72Q8NBR9 251 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 C11orf68Q9H3H3 251 aaKnown RBP8.85□□□□□ -0.99
TRAIP-209ENST00000488860 NOP10Q9NPE3 64 aaKnown RBP8.85□□□□□ -0.99
TRAIP-209ENST00000488860 OSTCQ9NRP0 149 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 CARHSP1Q9Y2V2 147 aaKnown RBP8.85□□□□□ -0.99
TRAIP-209ENST00000488860 U3KQK5 164 aa8.85□□□□□ -0.99
TRAIP-209ENST00000488860 PLAC8L1A1L4L8 177 aa8.84□□□□□ -0.99
TRAIP-209ENST00000488860 RNF212Q495C1 297 aa8.84□□□□□ -0.99
TRAIP-209ENST00000488860 C10orf91Q5T1B1 145 aa8.84□□□□□ -0.99
TRAIP-209ENST00000488860 MUC4Q99102 2169 aa8.84□□□□□ -0.99
TRAIP-209ENST00000488860 MRPL16Q9NX20 251 aaKnown RBP8.84□□□□□ -0.99
TRAIP-209ENST00000488860 CELA1Q9UNI1 258 aa8.84□□□□□ -0.99
TRAIP-209ENST00000488860 MT-ND4LP03901 98 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 CXCL1P09341 107 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 ARMS2P0C7Q2 107 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
TRAIP-209ENST00000488860 FAM222AQ5U5X8 452 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 FER1L6-AS1Q8NA97 138 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 IL17DQ8TAD2 202 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 V9GYV3 84 aa8.83□□□□□ -1
TRAIP-209ENST00000488860 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 A8MWL6 223 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 PPP1R2P9O14990 202 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 SSTP61278 116 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 CT83Q5H943 113 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 C9orf85Q96MD7 179 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 IL36BQ9NZH7 164 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 PHLDA3Q9Y5J5 127 aa8.82□□□□□ -1
TRAIP-209ENST00000488860 MUC21A0A0G2JKD1 596 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 MUC21A0A140T8X8 626 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 GAGE12BA1L429 117 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 CXorf65A6NEN9 183 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 M0R2P5 195 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 M0R381 172 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 GAGE7O76087 117 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 GAGE12FP0CL80 117 aa8.81□□□□□ -1
TRAIP-209ENST00000488860 GAGE12GP0CL81 117 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms